RNA–Protein interactions for RNA: ENST00000481147.1

RBM17-211, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 611 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-211	ENST00000481147	ZNF526	Q8TF50	670 aa	Predicted RBP	13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	HPS3	Q969F9	1004 aa		13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	DUSP9	Q99956	384 aa	Known RBP	13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	RUSC1	Q9BVN2	902 aa		13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	SEMA6B	Q9H3T3	888 aa		13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	MRPL44	Q9H9J2	332 aa	Known RBP	13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	RTN4	Q9NQC3	1192 aa	Known RBP	13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	NRBP1	Q9UHY1	535 aa		13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	KCNG1	Q9UIX4	513 aa		13.62	□□□□□ -0.23
RBM17-211	ENST00000481147	EIF3D	O15371	548 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	CALU	O43852	315 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	PEX10	O60683	326 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	ATG7	O95352	703 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	TPM1	P09493	284 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	RARRES1	P49788	294 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	ZNF131	P52739	623 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	COPB1	P53618	953 aa	Known RBP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	PMS1	P54277	932 aa	Known RBP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	ACTR2	P61160	394 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	RAD51AP2	Q09MP3	1159 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	MKRN3	Q13064	507 aa	Known RBP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	ALCAM	Q13740	583 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	KRT31	Q15323	416 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	LRRC41	Q15345	812 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	EDRF1	Q3B7T1	1238 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	ABHD15	Q6UXT9	468 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	SFR1	Q86XK3	245 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	LRRC8A	Q8IWT6	810 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	ANKRD13C	Q8N6S4	541 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	ZNF507	Q8TCN5	953 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	CEP63	Q96MT8	703 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	SLC5A4	Q9NY91	659 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	LARS	Q9P2J5	1176 aa	Known RBP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	GABBR1	Q9UBS5	961 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	PCDHB13	Q9Y5F0	798 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	UBE4B	O95155	1302 aa		13.61	□□□□□ -0.23
RBM17-211	ENST00000481147	PDXK	O00764	312 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	SUPT20HL2	P0C7V6	817 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	PRKCSH	P14314	528 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	RPL13	P26373	211 aa	Known RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	MAPK4	P31152	587 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	DNM2	P50570	870 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	CACNB1	Q02641	598 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	KNOP1	Q1ED39	458 aa	Known RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	BMT2	Q1RMZ1	405 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	FAM110C	Q1W6H9	321 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	CCDC144B	Q3MJ40	725 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	XKR9	Q5GH70	373 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	XKR3	Q5GH77	459 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	SWSAP1	Q6NVH7	229 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	RGMB	Q6NW40	437 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	APTX	Q7Z2E3	356 aa	Known RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	IRF2BP1	Q8IU81	584 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	SCFD1	Q8WVM8	642 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	CCDC102A	Q96A19	550 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	DRC1	Q96MC2	740 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	EFCC1	Q9HA90	598 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	MLXIP	Q9HAP2	919 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	TBC1D7	Q9P0N9	293 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	TRAF3IP3	Q9Y228	551 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	DIS3	Q9Y2L1	958 aa	Known RBP	13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	ASTN1	O14525	1302 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	ITIH6	Q6UXX5	1313 aa		13.6	□□□□□ -0.23
RBM17-211	ENST00000481147	KIAA1217	Q5T5P2	1943 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	BACH1	O14867	736 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	ZBTB39	O15060	712 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	CETN3	O15182	167 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	COBL	O75128	1261 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	GCNT3	O95395	438 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	PGK2	P07205	417 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	SFPQ	P23246	707 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	MTIF2	P46199	727 aa	Known RBP	13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	TRIM14	Q14142	442 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	FAM160B1	Q5W0V3	765 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	METTL7B	Q6UX53	244 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	CYFIP1	Q7L576	1253 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	PPFIBP1	Q86W92	1011 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	FAM178B	Q8IXR5	827 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	CCDC112	Q8NEF3	446 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	SEPT1	Q8WYJ6	367 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	CNOT6L	Q96LI5	555 aa	Known RBP	13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	ZNF830	Q96NB3	372 aa	Predicted RBP	13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	TUBGCP2	Q9BSJ2	902 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	PORCN	Q9H237	461 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	VPS16	Q9H269	839 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	C17orf75	Q9HAS0	396 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	ZNF302	Q9NR11	478 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	NRBP2	Q9NSY0	501 aa		13.59	□□□□□ -0.23
RBM17-211	ENST00000481147	LCT	P09848	1927 aa		13.58	□□□□□ -0.23
RBM17-211	ENST00000481147		A0A1W2PQC6	194 aa		13.58	□□□□□ -0.24
RBM17-211	ENST00000481147	ZNF500	O60304	480 aa	Predicted RBP	13.58	□□□□□ -0.24
RBM17-211	ENST00000481147	HIP1R	O75146	1068 aa		13.58	□□□□□ -0.24
RBM17-211	ENST00000481147	ABCD1	P33897	745 aa		13.58	□□□□□ -0.24
RBM17-211	ENST00000481147	SP2	Q02086	613 aa		13.58	□□□□□ -0.24
RBM17-211	ENST00000481147	TTLL4	Q14679	1199 aa		13.58	□□□□□ -0.24
RBM17-211	ENST00000481147	ZNF792	Q3KQV3	632 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms