RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PCDHA2Q9Y5H9 948 aa19.25■□□□□ 0.67
HSPG2-209ENST00000480900 EYSQ5T1H1 3165 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 PRRC2BQ5JSZ5 2229 aaKnown RBP19.24■□□□□ 0.67
HSPG2-209ENST00000480900 TTC3P53804 2025 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 WDR64B1ANS9 1081 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 GAS7O60861 476 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 CA3P07451 260 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 MGAT3Q09327 533 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 NSUN7Q8NE18 718 aaKnown RBP19.24■□□□□ 0.67
HSPG2-209ENST00000480900 MAFAQ8NHW3 353 aaPredicted RBP19.24■□□□□ 0.67
HSPG2-209ENST00000480900 TRAPPC12Q8WVT3 735 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 APBB2Q92870 758 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 MBOAT7Q96N66 472 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 PRDM12Q9H4Q4 367 aa19.24■□□□□ 0.67
HSPG2-209ENST00000480900 MAFBQ9Y5Q3 323 aaPredicted RBP19.24■□□□□ 0.67
HSPG2-209ENST00000480900 CUL9Q8IWT3 2517 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 A0A0C4DFX4 3053 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 CCDC194A0A1B0GVG4 234 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 TLL1O43897 1013 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 GJB5O95377 273 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 TDP2O95551 362 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 FDPSP14324 419 aaKnown RBP19.23■□□□□ 0.67
HSPG2-209ENST00000480900 MRPS6P82932 125 aaKnown RBP19.23■□□□□ 0.67
HSPG2-209ENST00000480900 INF2Q27J81 1249 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 LRCH2Q5VUJ6 765 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 BBXQ8WY36 941 aaPredicted RBP19.23■□□□□ 0.67
HSPG2-209ENST00000480900 GAS2L1Q99501 681 aaPredicted RBP19.23■□□□□ 0.67
HSPG2-209ENST00000480900 TEKT3Q9BXF9 490 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 IFIH1Q9BYX4 1025 aaKnown RBP19.23■□□□□ 0.67
HSPG2-209ENST00000480900 OSBPL7Q9BZF2 842 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 FAM49AQ9H0Q0 323 aaPredicted RBP19.23■□□□□ 0.67
HSPG2-209ENST00000480900 DISC1Q9NRI5 854 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 GJB4Q9NTQ9 266 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 IGSF9BQ9UPX0 1349 aa19.23■□□□□ 0.67
HSPG2-209ENST00000480900 SMIM35A0A1B0GVV1 85 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 DTNBO60941 627 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 PSMD10O75832 226 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 AMHP03971 560 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 ATP4AP20648 1035 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 SFNP31947 248 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 JAK3P52333 1124 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 ZNF484Q5JVG2 852 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 IER5Q5VY09 327 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 MTHFD1LQ6UB35 978 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 NEK8Q86SG6 692 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 SLC17A8Q8NDX2 589 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 ZBTB10Q96DT7 871 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 FAM167AQ96KS9 214 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 ZBED2Q9BTP6 218 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 LIMCH1Q9UPQ0 1083 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 SAMM50Q9Y512 469 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 CDY2AQ9Y6F7 541 aa19.22■□□□□ 0.67
HSPG2-209ENST00000480900 M0QZ92 97 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 GHRP10912 638 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 GCFC2P16383 781 aaKnown RBP19.21■□□□□ 0.67
HSPG2-209ENST00000480900 KLRC1P26715 233 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 FBXO47Q5MNV8 452 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.21■□□□□ 0.67
HSPG2-209ENST00000480900 TMCO2Q7Z6W1 182 aaPredicted RBP19.21■□□□□ 0.67
HSPG2-209ENST00000480900 NLRC5Q86WI3 1866 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 CKAP2LQ8IYA6 745 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 RDM1Q8NG50 284 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 ETNPPLQ8TBG4 499 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 OXER1Q8TDS5 423 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 RAD9AQ99638 391 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 KIF2CQ99661 725 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 BRMS1Q9HCU9 246 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 GABBR1Q9UBS5 961 aa19.21■□□□□ 0.67
HSPG2-209ENST00000480900 DDX25Q9UHL0 483 aaKnown RBP19.21■□□□□ 0.67
HSPG2-209ENST00000480900 ZBTB42B2RXF5 422 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 JAK2O60674 1132 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 TAP1Q03518 808 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 ST3GAL1Q11201 340 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 LPIN1Q14693 890 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 LETM2Q2VYF4 491 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 PIK3AP1Q6ZUJ8 805 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 NME8Q8N427 588 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 NAP1L4Q99733 375 aaKnown RBP19.2■□□□□ 0.66
HSPG2-209ENST00000480900 UNC45AQ9H3U1 944 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 TRPV2Q9Y5S1 764 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 SQORQ9Y6N5 450 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 KDM3AQ9Y4C1 1321 aa19.2■□□□□ 0.66
HSPG2-209ENST00000480900 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.19■□□□□ 0.66
HSPG2-209ENST00000480900 RBAK-RBAKDNI3L0D1 243 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 SLC37A4O43826 429 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 ARHGEF15O94989 841 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 KRT2P35908 639 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 RBM25P49756 843 aaKnown RBP19.19■□□□□ 0.66
HSPG2-209ENST00000480900 PPP4R3AQ6IN85 833 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 B3GNT9Q6UX72 402 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 TSHZ1Q6ZSZ6 1077 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 MYOCDQ8IZQ8 938 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 USP38Q8NB14 1042 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 TNFRSF25Q93038 417 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 GJA10Q969M2 543 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 CEP131Q9UPN4 1083 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 COL4A4P53420 1690 aaPredicted RBP19.19■□□□□ 0.66
HSPG2-209ENST00000480900 UNC80Q8N2C7 3258 aa19.19■□□□□ 0.66
HSPG2-209ENST00000480900 RALGAPA2Q2PPJ7 1873 aa19.18■□□□□ 0.66
HSPG2-209ENST00000480900 COL4A6Q14031 1691 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms