RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 RCBTB1Q8NDN9 531 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 DIS3LQ8TF46 1054 aaKnown RBP7.58□□□□□ -1.2
PBRM1-220ENST00000480064 TGFBRAP1Q8WUH2 860 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 JADE3Q92613 823 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 CCDC138Q96M89 665 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 ACO2Q99798 780 aaKnown RBP7.58□□□□□ -1.2
PBRM1-220ENST00000480064 PAGR1Q9BTK6 254 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 NAA15Q9BXJ9 866 aaKnown RBP7.58□□□□□ -1.2
PBRM1-220ENST00000480064 SP110Q9HB58 689 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 ARFGAP3Q9NP61 516 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 CBLCQ9ULV8 474 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 LRCH1Q9Y2L9 728 aa7.58□□□□□ -1.2
PBRM1-220ENST00000480064 GNAT1P11488 350 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 KIR3DL1P43629 444 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 GTF2A2P52657 109 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 KIF11P52732 1056 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 TRIM14Q14142 442 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 LLGL1Q15334 1064 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 UAP1L1Q3KQV9 507 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 DARS2Q6PI48 645 aaKnown RBP7.57□□□□□ -1.2
PBRM1-220ENST00000480064 LILRA6Q6PI73 481 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 MMS22LQ6ZRQ5 1243 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 SPRED2Q7Z698 418 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 FAM156AQ8NDB6 213 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 NETO1Q8TDF5 533 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 HPS3Q969F9 1004 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 MISP3Q96FF7 219 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 TMEM169Q96HH4 297 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 FCRL3Q96P31 734 aaPredicted RBP7.57□□□□□ -1.2
PBRM1-220ENST00000480064 MMP19Q99542 508 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 KCNJ15Q99712 375 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 TRMT13Q9NUP7 481 aaKnown RBP7.57□□□□□ -1.2
PBRM1-220ENST00000480064 KCNG1Q9UIX4 513 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 IPPQ9Y573 584 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 PCDHGB6Q9Y5F9 930 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 PCDHA11Q9Y5I1 949 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 DGKBQ9Y6T7 804 aa7.57□□□□□ -1.2
PBRM1-220ENST00000480064 hCG_1642624A0A1W2PR95 340 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 HRGP04196 525 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 GSTM1P09488 218 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 PDE6AP16499 860 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 BMP8BP34820 402 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 CASP2P42575 452 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 CTSKP43235 329 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 ALDH5A1P51649 535 aaPredicted RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 RPL11P62913 178 aaKnown RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 KIF23Q02241 960 aaPredicted RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 BNIP3Q12983 259 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 PLCL1Q15111 1095 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 ATAT1Q5SQI0 421 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 SFRP5Q5T4F7 317 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 WFDC3Q8IUB2 231 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 DENND1CQ8IV53 801 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 PLD6Q8N2A8 252 aaKnown RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 TOP6BLQ8N6T0 577 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 ENOX1Q8TC92 643 aaKnown RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 ELF4Q99607 663 aaPredicted RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 GTPBP4Q9BZE4 634 aaKnown RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 PRDM5Q9NQX1 630 aaPredicted RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 CLDND1Q9NY35 253 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 PPARGC1AQ9UBK2 798 aaKnown RBP7.56□□□□□ -1.2
PBRM1-220ENST00000480064 GPR45Q9Y5Y3 372 aa7.56□□□□□ -1.2
PBRM1-220ENST00000480064 SSU72P8A0A1W2PR75 194 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 A6NNZ2 444 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 CBX7O95931 251 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 OSMP13725 252 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 AGXTP21549 392 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 TM4SF4P48230 202 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 RENBPP51606 427 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 CACNB3P54284 484 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 LACTBP83111 547 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-220ENST00000480064 SMAD3P84022 425 aaKnown RBP7.55□□□□□ -1.2
PBRM1-220ENST00000480064 LSAMPQ13449 338 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 FZD5Q13467 585 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 LAPTM5Q13571 262 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 SMAD2Q15796 467 aaKnown RBP7.55□□□□□ -1.2
PBRM1-220ENST00000480064 SKAP1Q86WV1 359 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 ZNF655Q8N720 491 aaPredicted RBP7.55□□□□□ -1.2
PBRM1-220ENST00000480064 FAM181AQ8N9Y4 354 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 SGCZQ96LD1 299 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 HDAC8Q9BY41 377 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 ACSS2Q9NR19 701 aa7.55□□□□□ -1.2
PBRM1-220ENST00000480064 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 ZNF561-AS1K7EIQ3 104 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 MGEA5O60502 916 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 SLC5A1P13866 664 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 SLC16A1P53985 500 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 GEMIN4P57678 1058 aaKnown RBP7.54□□□□□ -1.2
PBRM1-220ENST00000480064 SRSF2Q01130 221 aaKnown RBP7.54□□□□□ -1.2
PBRM1-220ENST00000480064 SPIRE1Q08AE8 756 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 PUM3Q15397 648 aaKnown RBP7.54□□□□□ -1.2
PBRM1-220ENST00000480064 GPR19Q15760 415 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 ZNF792Q3KQV3 632 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 TOR2AQ5JU69 321 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 NAT16Q8N8M0 369 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 DAGLBQ8NCG7 672 aa7.54□□□□□ -1.2
PBRM1-220ENST00000480064 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.54□□□□□ -1.2
PBRM1-220ENST00000480064 DEPTORQ8TB45 409 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms