RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 MS4A4AQ96JQ5 239 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 CNOT6LQ96LI5 555 aaKnown RBP12.2□□□□□ -0.46
VTI1A-204ENST00000480057 PAGR1Q9BTK6 254 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 PARVGQ9HBI0 331 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 JPH1Q9HDC5 661 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-204ENST00000480057 SPTLC3Q9NUV7 552 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 WRAP73Q9P2S5 460 aaPredicted RBP12.2□□□□□ -0.46
VTI1A-204ENST00000480057 MORF4L1Q9UBU8 362 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 TRAF3IP3Q9Y228 551 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 SAMM50Q9Y512 469 aa12.2□□□□□ -0.46
VTI1A-204ENST00000480057 NPHP3-ACAD11A0A0J9YXS1 232 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 CCNE2O96020 404 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 RARRES1P49788 294 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 MARSP56192 900 aaKnown RBP12.19□□□□□ -0.46
VTI1A-204ENST00000480057 ERVK-9P63128 1117 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 ERVK-24P63145 666 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 CCZ1BP86790 482 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 CCZ1P86791 482 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-204ENST00000480057 NFIL3Q16649 462 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 HSP90AA4PQ58FG1 418 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 SPRYD7Q5W111 196 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 ARMCX5Q6P1M9 558 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 PADI6Q6TGC4 694 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 OTUD6AQ7L8S5 288 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 SFR1Q86XK3 245 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 ABRAQ8N0Z2 381 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 BANK1Q8NDB2 785 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 TUBGCP2Q9BSJ2 902 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 KCTD10Q9H3F6 313 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 TMX1Q9H3N1 280 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 ZNF408Q9H9D4 720 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 TXNRD2Q9NNW7 524 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 TAB2Q9NYJ8 693 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 PKD2L1Q9P0L9 805 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.19□□□□□ -0.46
VTI1A-204ENST00000480057 SLC9A2Q9UBY0 812 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 KIAA1217Q5T5P2 1943 aa12.19□□□□□ -0.46
VTI1A-204ENST00000480057 ASTN1O14525 1302 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 PDXKO00764 312 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 CALUO43852 315 aaPredicted RBP12.18□□□□□ -0.46
VTI1A-204ENST00000480057 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
VTI1A-204ENST00000480057 ATG7O95352 703 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 TPM1P09493 284 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 SKILP12757 684 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 YWHABP31946 246 aaKnown RBP12.18□□□□□ -0.46
VTI1A-204ENST00000480057 CNTN2Q02246 1040 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 LRMPQ12912 555 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 NEDD9Q14511 834 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 LRRC41Q15345 812 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 CCL15Q16663 113 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 KNOP1Q1ED39 458 aaKnown RBP12.18□□□□□ -0.46
VTI1A-204ENST00000480057 MIS18BP1Q6P0N0 1132 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 PPFIBP1Q86W92 1011 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 GPRC5AQ8NFJ5 357 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 PANX2Q96RD6 677 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 MMP19Q99542 508 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 ZHX3Q9H4I2 956 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 MRPL44Q9H9J2 332 aaKnown RBP12.18□□□□□ -0.46
VTI1A-204ENST00000480057 ZCCHC17Q9NP64 241 aaKnown RBP12.18□□□□□ -0.46
VTI1A-204ENST00000480057 PYCARDQ9ULZ3 195 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 TRPM7Q96QT4 1865 aa12.18□□□□□ -0.46
VTI1A-204ENST00000480057 IGSF9BQ9UPX0 1349 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 AKR1B15C9JRZ8 316 aaPredicted RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 PDHXO00330 501 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 TEX33O43247 280 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 COBLO75128 1261 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 SUPT20HL2P0C7V6 817 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 RPL13P26373 211 aaKnown RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 MTIF2P46199 727 aaKnown RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 ACTR2P61160 394 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 PPP2R3AQ06190 1150 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 NOLC1Q14978 699 aaKnown RBP eCLIP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 MAN2A1Q16706 1144 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 Q3C1V9 767 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 FIGNQ5HY92 759 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 FKBP15Q5T1M5 1219 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 CHADLQ6NUI6 762 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 ABHD15Q6UXT9 468 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 CNGA4Q8IV77 575 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 MYCT1Q8N699 235 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 GOLGA5Q8TBA6 731 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 TMEM174Q8WUU8 243 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 BRI3BPQ8WY22 251 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 DRC1Q96MC2 740 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 CCDC43Q96MW1 224 aaKnown RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 PARK7Q99497 189 aaKnown RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 NUP58Q9BVL2 599 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 NAA15Q9BXJ9 866 aaKnown RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 VPS16Q9H269 839 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 ST6GALNAC4Q9H4F1 302 aa12.17□□□□□ -0.46
VTI1A-204ENST00000480057 TYW1Q9NV66 732 aaKnown RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 LARSQ9P2J5 1176 aaKnown RBP12.17□□□□□ -0.46
VTI1A-204ENST00000480057 KCNG1Q9UIX4 513 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms