RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 PTCH2Q9Y6C5 1203 aa7.75□□□□□ -1.17
COMMD3-212ENST00000479958 FAM90A27PA6NNH2 459 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 KCNQ2O43526 872 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 BMS1Q14692 1282 aaKnown RBP7.74□□□□□ -1.17
COMMD3-212ENST00000479958 ZNF827Q17R98 1081 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 TBC1D10BQ4KMP7 808 aaPredicted RBP7.74□□□□□ -1.17
COMMD3-212ENST00000479958 PHF19Q5T6S3 580 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 KBTBD2Q8IY47 623 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 STPG3Q8N7X2 389 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 SLC7A14Q8TBB6 771 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 ZSWIM4Q9H7M6 989 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 JADE2Q9NQC1 790 aa7.74□□□□□ -1.17
COMMD3-212ENST00000479958 H0Y858 1186 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 ZNF561-AS1K7EIQ3 104 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 LAMTOR5O43504 91 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 KNG1P01042 644 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 PPP2CBP62714 309 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 PPP2CAP67775 309 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 ARHGEF18Q6ZSZ5 1173 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 WDR48Q8TAF3 677 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 CELF4Q9BZC1 486 aaKnown RBP7.73□□□□□ -1.17
COMMD3-212ENST00000479958 SLC39A2Q9NP94 309 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 FHOD3Q2V2M9 1422 aa7.73□□□□□ -1.17
COMMD3-212ENST00000479958 PLD2O14939 933 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 B4GALT3O60512 393 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 B4GALT4O60513 344 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 COL6A1P12109 1028 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 HERVK_113P62684 666 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 Q6ZUG5 572 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 NUDT10Q8NFP7 164 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 NUDT11Q96G61 164 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 TACO1Q9BSH4 297 aaKnown RBP7.72□□□□□ -1.17
COMMD3-212ENST00000479958 KCND1Q9NSA2 647 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 ADAM29Q9UKF5 820 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 CTTNBP2Q8WZ74 1663 aa7.72□□□□□ -1.17
COMMD3-212ENST00000479958 NPEPPSL1A6NEC2 478 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 PRAMEF25A6NGN4 478 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 B4E1Z4 1266 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 KLHL18O94889 574 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 RASGRP1O95267 797 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 EFEMP1Q12805 493 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 PKN3Q6P5Z2 889 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 HHIPL2Q6UWX4 724 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 MBD6Q96DN6 1003 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 BORCS6Q96GS4 357 aa7.71□□□□□ -1.17
COMMD3-212ENST00000479958 RBM15Q96T37 977 aaKnown RBP eCLIP7.71□□□□□ -1.17
COMMD3-212ENST00000479958 NCOA5Q9HCD5 579 aaKnown RBP7.71□□□□□ -1.17
COMMD3-212ENST00000479958 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.7□□□□□ -1.18
COMMD3-212ENST00000479958 TCRBV16S1A1N1A0A5B0 115 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 ADRB1P08588 477 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 PTGS1P23219 599 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 DBX2Q6ZNG2 339 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 BRAPQ7Z569 592 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 REXO1L1PQ8IX06 675 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 CISD2Q8N5K1 135 aaKnown RBP7.7□□□□□ -1.18
COMMD3-212ENST00000479958 C2orf69Q8N8R5 385 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 SCLYQ96I15 445 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 AJUBAQ96IF1 538 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 SAMD11Q96NU1 681 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 KRTAP4-11Q9BYQ6 195 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 SMURF1Q9HCE7 757 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 COQ6Q9Y2Z9 468 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 GRIN2AQ12879 1464 aa7.7□□□□□ -1.18
COMMD3-212ENST00000479958 SLC12A8A0AV02 714 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 CUTAO60888 179 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 IL18BPO95998 194 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 FNDC3BQ53EP0 1204 aaKnown RBP7.69□□□□□ -1.18
COMMD3-212ENST00000479958 RALYLQ86SE5 291 aaKnown RBP7.69□□□□□ -1.18
COMMD3-212ENST00000479958 DDX53Q86TM3 631 aaKnown RBP7.69□□□□□ -1.18
COMMD3-212ENST00000479958 CHST13Q8NET6 341 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 LOXL4Q96JB6 756 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 INCENPQ9NQS7 918 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 SMPD4Q9NXE4 827 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 GALNT8Q9NY28 637 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 SCDO00767 359 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 KCNK3O14649 394 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 HIP1RO75146 1068 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 C4BPAP04003 597 aaKnown RBP7.69□□□□□ -1.18
COMMD3-212ENST00000479958 MAGEA10P43363 369 aaPredicted RBP7.69□□□□□ -1.18
COMMD3-212ENST00000479958 ARHGAP44Q17R89 818 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 WDR72Q3MJ13 1102 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 CXXC5Q7LFL8 322 aaKnown RBP7.69□□□□□ -1.18
COMMD3-212ENST00000479958 NPM2Q86SE8 214 aaKnown RBP7.69□□□□□ -1.18
COMMD3-212ENST00000479958 IFNL2Q8IZJ0 200 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 IGSF22Q8N9C0 903 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 KCNH7Q9NS40 1196 aa7.69□□□□□ -1.18
COMMD3-212ENST00000479958 MAGI1Q96QZ7 1491 aaPredicted RBP7.68□□□□□ -1.18
COMMD3-212ENST00000479958 POLD1P28340 1107 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 EPHB4P54760 987 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 CCDC144BQ3MJ40 725 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 ZNF568Q3ZCX4 644 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 OVCH1Q7RTY7 1134 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 TTC9BQ8N6N2 239 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 GPR20Q99678 358 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 CARD11Q9BXL7 1154 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 TRIM39Q9HCM9 518 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 FBXO10Q9UK96 956 aa7.68□□□□□ -1.18
COMMD3-212ENST00000479958 SYNJ2O15056 1496 aa7.67□□□□□ -1.18
COMMD3-212ENST00000479958 ESYT3A0FGR9 886 aa7.67□□□□□ -1.18
COMMD3-212ENST00000479958 RAPGEF3O95398 923 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms