RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 IQUBQ8NA54 791 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 PCSK9Q8NBP7 692 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 TIGD1Q96MW7 591 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 NACC1Q96RE7 527 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 KATNAL1Q9BW62 490 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 CRISPLD2Q9H0B8 497 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 RNF208Q9H0X6 261 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 BLOC1S4Q9NUP1 217 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 DDX19AQ9NUU7 478 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 ERAP1Q9NZ08 941 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 DBR1Q9UK59 544 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 OGDHLQ9ULD0 1010 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 PPME1Q9Y570 386 aa14.03□□□□□ -0.16
TRAPPC12-218ENST00000479897 KAT6AQ92794 2004 aa14.02□□□□□ -0.16
TRAPPC12-218ENST00000479897 MOXD2PA6NHM9 499 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 HAS3O00219 553 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 ACTN4O43707 911 aaKnown RBP14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 OATP04181 439 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 GJB1P08034 283 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 ZNF286BP0CG31 522 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 LIG1P18858 919 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 ATP4AP20648 1035 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 STAT6P42226 847 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 BEX3Q00994 111 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 NFKBIBQ15653 356 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 GNASQ5JWF2 1037 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 RRAGBQ5VZM2 374 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 KCNK18Q7Z418 384 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 TPH2Q8IWU9 490 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 RASSF8Q8NHQ8 419 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 ATP8B4Q8TF62 1192 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 LRRC15Q8TF66 581 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 BBXQ8WY36 941 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 LARP4BQ92615 738 aaKnown RBP14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 KAT2BQ92831 832 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 GLG1Q92896 1179 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 ANKEF1Q9NU02 776 aa14.02□□□□□ -0.17
TRAPPC12-218ENST00000479897 COL1A2P08123 1366 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 H3BRB1 525 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 DNM1LO00429 736 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 POLR2DO15514 142 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 NR1I2O75469 434 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 CABYRO75952 493 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 ZNF202O95125 648 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 EYA4O95677 639 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 YWHABP31946 246 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 PLCB4Q15147 1175 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 UTP14CQ5TAP6 766 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 ANO5Q75V66 913 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 ELOA2Q8IYF1 753 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 PDILTQ8N807 584 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 GPT2Q8TD30 523 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 RAD54LQ92698 747 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 DEFB118Q96PH6 123 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 MTG1Q9BT17 334 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 NIFKQ9BYG3 293 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 TUT1Q9H6E5 874 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 DNM3Q9UQ16 869 aa14.01□□□□□ -0.17
TRAPPC12-218ENST00000479897 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
TRAPPC12-218ENST00000479897 E9PMD0 336 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 HBP1O60381 514 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 SGPL1O95470 568 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 ASGR1P07306 291 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 MYL3P08590 195 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 SLFN14P0C7P3 912 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 HOXC8P31273 242 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 RARRES1P49788 294 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 PSMC6P62333 389 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 TARBP2Q15633 366 aaKnown RBP14□□□□□ -0.17
TRAPPC12-218ENST00000479897 KCNA10Q16322 511 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 KRBA2Q6ZNG9 492 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 OTUD6AQ7L8S5 288 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 ANKLE1Q8NAG6 615 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 U2AF1L4Q8WU68 220 aaKnown RBP14□□□□□ -0.17
TRAPPC12-218ENST00000479897 DHX58Q96C10 678 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 TNMDQ9H2S6 317 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 KBTBD4Q9NVX7 518 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 KCND2Q9NZV8 630 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 PHF24Q9UPV7 400 aa14□□□□□ -0.17
TRAPPC12-218ENST00000479897 KBTBD13C9JR72 458 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 KINO60870 393 aaKnown RBP13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 MYL1P05976 194 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 GJA8P48165 433 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 PSEN2P49810 448 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 SLC12A3P55017 1021 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 MFSD10Q14728 455 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 ZRSR1Q15695 479 aaKnown RBP13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 KLHL40Q2TBA0 621 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 KANK3Q6NY19 840 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 CNNM4Q6P4Q7 775 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 SH3RF1Q7Z6J0 888 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 SESTD1Q86VW0 696 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 CEP57L1Q8IYX8 460 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 SYT2Q8N9I0 419 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 PIGOQ8TEQ8 1089 aa13.99□□□□□ -0.17
TRAPPC12-218ENST00000479897 CCDC34Q96HJ3 373 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms