RNA–Protein interactions for RNA: ENST00000479647.1

NCBP2-212, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 3

Gene NCBP2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-212ENST00000479647 TLR9Q9NR96 1032 aa13.03□□□□□ -0.32
NCBP2-212ENST00000479647 GINS2Q9Y248 185 aa13.03□□□□□ -0.32
NCBP2-212ENST00000479647 PCDHB12Q9Y5F1 795 aa13.03□□□□□ -0.32
NCBP2-212ENST00000479647 MYH9P35579 1960 aaKnown RBP13.02□□□□□ -0.32
NCBP2-212ENST00000479647 RRN3P2A6NIE6 340 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 TBKBP1A7MCY6 615 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 PDGFBP01127 241 aaPredicted RBP13.02□□□□□ -0.33
NCBP2-212ENST00000479647 NFX1Q12986 1120 aaKnown RBP13.02□□□□□ -0.33
NCBP2-212ENST00000479647 PTPN21Q16825 1174 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 PLPP4Q5VZY2 271 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 XRRA1Q6P2D8 792 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 CATIPQ7Z7H3 387 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 RALYLQ86SE5 291 aaKnown RBP13.02□□□□□ -0.33
NCBP2-212ENST00000479647 THNSL1Q8IYQ7 743 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 GPRASP2Q96D09 838 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 CDHR1Q96JP9 859 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 IL25Q9H293 177 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 TSHZ2Q9NRE2 1034 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 HCSTQ9UBK5 93 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
NCBP2-212ENST00000479647 PCDHB7Q9Y5E2 793 aa13.02□□□□□ -0.33
NCBP2-212ENST00000479647 ZFHX2Q9C0A1 2572 aaPredicted RBP13.01□□□□□ -0.33
NCBP2-212ENST00000479647 MEIS2O14770 477 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 ATF7P17544 494 aaPredicted RBP13.01□□□□□ -0.33
NCBP2-212ENST00000479647 TECP42680 631 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 TROAPQ12815 778 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 MTMR1Q13613 665 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 SART3Q15020 963 aaKnown RBP13.01□□□□□ -0.33
NCBP2-212ENST00000479647 CHD1LQ86WJ1 897 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 CRIPAKQ8N1N5 446 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 RRP36Q96EU6 259 aaKnown RBP13.01□□□□□ -0.33
NCBP2-212ENST00000479647 MYL10Q9BUA6 226 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 CELF4Q9BZC1 486 aaKnown RBP13.01□□□□□ -0.33
NCBP2-212ENST00000479647 IRF2BPLQ9H1B7 796 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 AZI2Q9H6S1 392 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 AAASQ9NRG9 546 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 TMEM260Q9NX78 707 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 IGSF9BQ9UPX0 1349 aa13.01□□□□□ -0.33
NCBP2-212ENST00000479647 FAM186AA6NE01 2351 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 FGF18O76093 207 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 RPLP2P05387 115 aaKnown RBP13□□□□□ -0.33
NCBP2-212ENST00000479647 SRGAP2BP0DMP2 458 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 ITGB5P18084 799 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 SARSP49591 514 aaKnown RBP13□□□□□ -0.33
NCBP2-212ENST00000479647 ERVFC1P60507 584 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 KRT76Q01546 638 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 UBE3AQ05086 875 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 APOBRQ0VD83 1088 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 UBE2SQ16763 222 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 DUSP6Q16828 381 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 COLGALT1Q8NBJ5 622 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 SUSD6Q92537 303 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 PCYT2Q99447 389 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 TMX1Q9H3N1 280 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 OSBPL3Q9H4L5 887 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 SQORQ9Y6N5 450 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 SPTBN4Q9H254 2564 aa13□□□□□ -0.33
NCBP2-212ENST00000479647 CFAP54Q96N23 3096 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 DENND3A2RUS2 1198 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 PIK3CDO00329 1044 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 MGEA5O60502 916 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 CYP21A2P08686 494 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 PLCB4Q15147 1175 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 FAM102BQ5T8I3 360 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 NCOA7Q8NI08 942 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 CTCFLQ8NI51 663 aaPredicted RBP12.99□□□□□ -0.33
NCBP2-212ENST00000479647 ATP8B4Q8TF62 1192 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 RIPOR3Q96MK2 946 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 PPP1R16BQ96T49 567 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 CDCA3Q99618 268 aaPredicted RBP12.99□□□□□ -0.33
NCBP2-212ENST00000479647 JPH1Q9HDC5 661 aaPredicted RBP12.99□□□□□ -0.33
NCBP2-212ENST00000479647 ENTPD7Q9NQZ7 604 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 SLC9A2Q9UBY0 812 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 CDH22Q9UJ99 828 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 PCDHA2Q9Y5H9 948 aa12.99□□□□□ -0.33
NCBP2-212ENST00000479647 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
NCBP2-212ENST00000479647 RIF1Q5UIP0 2472 aaKnown RBP12.99□□□□□ -0.33
NCBP2-212ENST00000479647 hCG_1642624A0A1W2PR95 340 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 FSD2A1L4K1 749 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 SPDYE3A6NKU9 549 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 RPS6KA5O75582 802 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 FGFR1P11362 822 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 ANKRD54Q6NXT1 300 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 ASCL5Q7RTU5 278 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 SMC5Q8IY18 1101 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 CMTR1Q8N1G2 835 aaKnown RBP12.98□□□□□ -0.33
NCBP2-212ENST00000479647 KREMEN2Q8NCW0 462 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
NCBP2-212ENST00000479647 ADAM2Q99965 735 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 TCF25Q9BQ70 676 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
NCBP2-212ENST00000479647 UBIAD1Q9Y5Z9 338 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 TAF6LQ9Y6J9 622 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 WDR81Q562E7 1941 aa12.98□□□□□ -0.33
NCBP2-212ENST00000479647 SMIM35A0A1B0GVV1 85 aa12.97□□□□□ -0.33
NCBP2-212ENST00000479647 E7EWF7 191 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms