RNA–Protein interactions for RNA: ENST00000479365.5

SSR1-206, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-206ENST00000479365 ARHGAP1Q07960 439 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 TRDNQ13061 729 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 PPIGQ13427 754 aaKnown RBP eCLIP8.43□□□□□ -1.068e-18■□□□□ 9
SSR1-206ENST00000479365 MTMR3Q13615 1198 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 MRPL58Q14197 206 aaKnown RBP8.43□□□□□ -1.06
SSR1-206ENST00000479365 TTLL4Q14679 1199 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 WTAPQ15007 396 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 LY6KQ17RY6 165 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 SEPT14Q6ZU15 432 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 CYP2U1Q7Z449 544 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 RALYLQ86SE5 291 aaKnown RBP8.43□□□□□ -1.06
SSR1-206ENST00000479365 HOMER1Q86YM7 354 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 MCF2L2Q86YR7 1114 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 TMEM199Q8N511 208 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 SLC17A8Q8NDX2 589 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 IL31RAQ8NI17 732 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 NSUN6Q8TEA1 469 aaKnown RBP8.43□□□□□ -1.06
SSR1-206ENST00000479365 UBXN4Q92575 508 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 ZFP42Q96MM3 310 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 CDX2Q99626 313 aaPredicted RBP8.43□□□□□ -1.06
SSR1-206ENST00000479365 ESYT1Q9BSJ8 1104 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 MTG1Q9BT17 334 aaPredicted RBP8.43□□□□□ -1.06
SSR1-206ENST00000479365 MYL10Q9BUA6 226 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 MAF1Q9H063 256 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 HIPK3Q9H422 1215 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 RIOX1Q9H6W3 641 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 LY9Q9HBG7 655 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 PXMP2Q9NR77 195 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 MRPL11Q9Y3B7 192 aaKnown RBP8.43□□□□□ -1.06
SSR1-206ENST00000479365 PCDHA1Q9Y5I3 950 aa8.43□□□□□ -1.06
SSR1-206ENST00000479365 CDH23Q9H251 3354 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.42□□□□□ -1.06
SSR1-206ENST00000479365 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.42□□□□□ -1.06
SSR1-206ENST00000479365 SLC27A2O14975 620 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 LGR5O75473 907 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 UPP2O95045 317 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 MMP3P08254 477 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 PTGIRP43119 386 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 STXBP2Q15833 593 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 TMEM67Q5HYA8 995 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 ARHGEF16Q5VV41 709 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 CAPN12Q6ZSI9 719 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 AFG1LQ8WV93 481 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 MYLIPQ8WY64 445 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 KAT2BQ92831 832 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 SCLYQ96I15 445 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 CTAGE1Q96RT6 745 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 IWS1Q96ST2 819 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 MPHOSPH6Q99547 160 aaKnown RBP8.42□□□□□ -1.06
SSR1-206ENST00000479365 PDCD2LQ9BRP1 358 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 MKNK1Q9BUB5 465 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 SEZ6LQ9BYH1 1024 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 IL23AQ9NPF7 189 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 RAB6BQ9NRW1 208 aa8.42□□□□□ -1.06
SSR1-206ENST00000479365 DDX41Q9UJV9 622 aaKnown RBP8.42□□□□□ -1.06
SSR1-206ENST00000479365 SCN10AQ9Y5Y9 1956 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 ERICH2A1L162 156 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 M0R2N6 131 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 SH2B2O14492 632 aaPredicted RBP8.41□□□□□ -1.06
SSR1-206ENST00000479365 PRC1O43663 620 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 EIF3JO75822 258 aaKnown RBP8.41□□□□□ -1.06
SSR1-206ENST00000479365 GH1P01241 217 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 PGM5Q15124 567 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 NECTIN1Q15223 517 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 SF3A1Q15459 793 aaKnown RBP8.41□□□□□ -1.06
SSR1-206ENST00000479365 FAM47CQ5HY64 1035 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 CREB3L3Q68CJ9 461 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
SSR1-206ENST00000479365 ZNF654Q8IZM8 581 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 PIBF1Q8WXW3 757 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 HERVK_113Q902F9 699 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 INSM2Q96T92 566 aaPredicted RBP8.41□□□□□ -1.06
SSR1-206ENST00000479365 PBX4Q9BYU1 374 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 BACH2Q9BYV9 841 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 BCAS3Q9H6U6 928 aa8.41□□□□□ -1.06
SSR1-206ENST00000479365 EYSQ5T1H1 3165 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 PNMA6FA0A0J9YX94 578 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 B4DLN1 442 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 GCOM1H8Y6P7 765 aaPredicted RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 SPINT1O43278 529 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 SORBS3O60504 671 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 KPNA6O60684 536 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 DDAH1O94760 285 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 PLEKHA8P1O95397 391 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 FGBP02675 491 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 P4HBP07237 508 aaKnown RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 POLR2MP0CAP2 368 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 MYCLP12524 364 aaPredicted RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 NPR3P17342 541 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 RXRAP19793 462 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 MRPL12P52815 198 aaKnown RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 CHMP4BP1P59074 171 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 SP2Q02086 613 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 SART3Q15020 963 aaKnown RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 BRDTQ58F21 947 aaPredicted RBP8.4□□□□□ -1.06
SSR1-206ENST00000479365 NFRKBQ6P4R8 1299 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 OTOP2Q7RTS6 562 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 CATIPQ7Z7H3 387 aa8.4□□□□□ -1.06
SSR1-206ENST00000479365 VSIG10LQ86VR7 867 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms