RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 KNG1P01042 644 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 ZNF888P0CJ79 500 aaPredicted RBP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PYGMP11217 842 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PTPN1P18031 435 aaKnown RBP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PTGS1P23219 599 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 POLD1P28340 1107 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 CSF2RBP32927 897 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 GJA4P35212 333 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 GTF2F1P35269 517 aaKnown RBP eCLIP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 HHEXQ03014 270 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 GPR19Q15760 415 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 NTRK3Q16288 839 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 FIGNQ5HY92 759 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 ARHGAP36Q6ZRI8 547 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 MAMDC2Q7Z304 686 aaPredicted RBP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 TAX1BP1Q86VP1 789 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PROSER1Q86XN7 944 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PTRH1Q86Y79 214 aaKnown RBP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 RTKN2Q8IZC4 609 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 HIPK4Q8NE63 616 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 OSBP2Q969R2 916 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 FBXW5Q969U6 566 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 ZG16BQ96DA0 208 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 NEIL1Q96FI4 390 aaPredicted RBP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 DPYSL5Q9BPU6 564 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 TANGO6Q9C0B7 1094 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 MEGF9Q9H1U4 602 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 IKZF4Q9H2S9 585 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 CDIP1Q9H305 208 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 SEC61A2Q9H9S3 476 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 KCND1Q9NSA2 647 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 NDOR1Q9UHB4 597 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PUF60Q9UHX1 559 aaKnown RBP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 SRPK3Q9UPE1 567 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 ZFR2Q9UPR6 939 aaKnown RBP2.21□□□□□ -2.06
SRRM1-211ENST00000478890 WASF3Q9UPY6 502 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PTPN22Q9Y2R2 807 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 PCDHA8Q9Y5H6 950 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 SLC4A7Q9Y6M7 1214 aa2.21□□□□□ -2.06
SRRM1-211ENST00000478890 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.2□□□□□ -2.06
SRRM1-211ENST00000478890 CCDC66A2RUB6 948 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 PATE3B3GLJ2 98 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 E9PSI1 815 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 SCDO00767 359 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 KLF4O43474 513 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 FOXS1O43638 330 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 HIP1RO75146 1068 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 CNOT4O95628 575 aaKnown RBP2.2□□□□□ -2.06
SRRM1-211ENST00000478890 COL6A1P12109 1028 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 PDE6AP16499 860 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 ATP2B1P20020 1258 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 CR2P20023 1033 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 COMTP21964 271 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 ZC3H6P61129 1189 aaKnown RBP2.2□□□□□ -2.06
SRRM1-211ENST00000478890 DPTQ07507 201 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 DBPQ10586 325 aaPredicted RBP2.2□□□□□ -2.06
SRRM1-211ENST00000478890 CDSNQ15517 529 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 GPR162Q16538 588 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 TCTN3Q6NUS6 607 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 SPATC1Q76KD6 591 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 SLC43A3Q8NBI5 491 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 Q8TCH9 128 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 ERCC4Q92889 916 aaPredicted RBP2.2□□□□□ -2.06
SRRM1-211ENST00000478890 PTPRN2Q92932 1015 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 FAM89AQ96GI7 184 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 AJUBAQ96IF1 538 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 SCYL1Q96KG9 808 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 SSBP3Q9BWW4 388 aaPredicted RBP2.2□□□□□ -2.06
SRRM1-211ENST00000478890 KIAA1683Q9H0B3 1180 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 CD248Q9HCU0 757 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 INCENPQ9NQS7 918 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 UCKL1Q9NWZ5 548 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 FBXO10Q9UK96 956 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 CDC42EP3Q9UKI2 254 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 OAZ3Q9UMX2 235 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 TELO2Q9Y4R8 837 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 PCDHA9Q9Y5H5 950 aa2.2□□□□□ -2.06
SRRM1-211ENST00000478890 KDM2BQ8NHM5 1336 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 ASXL2Q76L83 1435 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 ACOT7O00154 380 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 KRT37O76014 449 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 ZNF202O95125 648 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 IL18BPO95998 194 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 ACO1P21399 889 aaKnown RBP2.19□□□□□ -2.06
SRRM1-211ENST00000478890 FBLP22087 321 aaKnown RBP2.19□□□□□ -2.06
SRRM1-211ENST00000478890 MC4RP32245 332 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 ETV4P43268 484 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 EPHA5P54756 1037 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 GABREP78334 506 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 IL13RA1P78552 427 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 ABHD18Q0P651 414 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 CRHR2Q13324 411 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 TOP3AQ13472 1001 aaPredicted RBP2.19□□□□□ -2.06
SRRM1-211ENST00000478890 NOLC1Q14978 699 aaKnown RBP eCLIP2.19□□□□□ -2.06
SRRM1-211ENST00000478890 TMEM132BQ14DG7 1078 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 CCDC142Q17RM4 750 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 RNF151Q2KHN1 245 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 USP39Q53GS9 565 aaKnown RBP2.19□□□□□ -2.06
SRRM1-211ENST00000478890 NAALADL2Q58DX5 795 aa2.19□□□□□ -2.06
SRRM1-211ENST00000478890 FAM209AQ5JX71 171 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms