RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 GNAT1P11488 350 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 FXR2P51116 673 aaKnown RBP eCLIP30.09■■■□□ 2.41
CCM2-211ENST00000478582 HIC1Q14526 733 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 NCAPH2Q6IBW4 605 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 POTEBQ6S5H4 581 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 ATP6V0A1Q93050 837 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 CTAGE1Q96RT6 745 aa30.09■■■□□ 2.41
CCM2-211ENST00000478582 ZNF862O60290 1169 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 HBP1O60381 514 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 P4HBP07237 508 aaKnown RBP30.08■■■□□ 2.41
CCM2-211ENST00000478582 ACRP10323 421 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 SMAD3P84022 425 aaKnown RBP30.08■■■□□ 2.41
CCM2-211ENST00000478582 PKP1Q13835 747 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 UGCGQ16739 394 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 PSRC1Q6PGN9 363 aaPredicted RBP30.08■■■□□ 2.41
CCM2-211ENST00000478582 ZNF365Q70YC5 407 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 DEFB123Q8N688 67 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 BBXQ8WY36 941 aaPredicted RBP30.08■■■□□ 2.41
CCM2-211ENST00000478582 FAM167AQ96KS9 214 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 SETD4Q9NVD3 440 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 NOD1Q9Y239 953 aa30.08■■■□□ 2.41
CCM2-211ENST00000478582 RRN3P2A6NIE6 340 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 F13A1P00488 732 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 INSRRP14616 1297 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 TECP42680 631 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 PSMC5P62195 406 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 PPFIA1Q13136 1202 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 PDIA5Q14554 519 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 TMEM266Q2M3C6 531 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 ARL6IP4Q66PJ3 421 aaKnown RBP30.07■■■□□ 2.4
CCM2-211ENST00000478582 FAM109BQ6ICB4 259 aaPredicted RBP30.07■■■□□ 2.4
CCM2-211ENST00000478582 FAM173BQ6P4H8 233 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 LMBR1Q8WVP7 490 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 CEP131Q9UPN4 1083 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 TRPC6Q9Y210 931 aa30.07■■■□□ 2.4
CCM2-211ENST00000478582 DKC1O60832 514 aaKnown RBP eCLIP30.06■■■□□ 2.4
CCM2-211ENST00000478582 QARSP47897 775 aaKnown RBP30.06■■■□□ 2.4
CCM2-211ENST00000478582 SF3A1Q15459 793 aaKnown RBP30.06■■■□□ 2.4
CCM2-211ENST00000478582 GRIK4Q16099 956 aa30.06■■■□□ 2.4
CCM2-211ENST00000478582 Q7L0L9 218 aa30.06■■■□□ 2.4
CCM2-211ENST00000478582 RPUSD2Q8IZ73 545 aaKnown RBP30.06■■■□□ 2.4
CCM2-211ENST00000478582 NEK9Q8TD19 979 aa30.06■■■□□ 2.4
CCM2-211ENST00000478582 HSD17B14Q9BPX1 270 aa30.06■■■□□ 2.4
CCM2-211ENST00000478582 POTEMA6NI47 508 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 BRD1O95696 1058 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 FGBP02675 491 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 ANP32AP39687 249 aaKnown RBP30.05■■■□□ 2.4
CCM2-211ENST00000478582 ZNF200P98182 395 aaPredicted RBP30.05■■■□□ 2.4
CCM2-211ENST00000478582 PRKCEQ02156 737 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 PTK7Q13308 1070 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 DTHD1Q6ZMT9 781 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 CKAP2LQ8IYA6 745 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 IGSF22Q8N9C0 903 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 BANK1Q8NDB2 785 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 SCLYQ96I15 445 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 EIF2AK1Q9BQI3 630 aaKnown RBP30.05■■■□□ 2.4
CCM2-211ENST00000478582 NRBP2Q9NSY0 501 aa30.05■■■□□ 2.4
CCM2-211ENST00000478582 COL1A2P08123 1366 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 HSFX4A0A1B0GTS1 333 aaPredicted RBP30.04■■■□□ 2.4
CCM2-211ENST00000478582 HSFX3A0A1B0GWH4 333 aaPredicted RBP30.04■■■□□ 2.4
CCM2-211ENST00000478582 MBLAC1A4D2B0 266 aaPredicted RBP30.04■■■□□ 2.4
CCM2-211ENST00000478582 PITPNM1O00562 1244 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 SLITRK3O94933 977 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 STBD1O95210 358 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 OATP04181 439 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 BFSP2Q13515 415 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 IL17AQ16552 155 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 XKR3Q5GH77 459 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 ZNF484Q5JVG2 852 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 MARCH8Q5T0T0 291 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 RASIP1Q5U651 963 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 SERINC5Q86VE9 423 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 RETREG2Q8NC44 543 aa30.04■■■□□ 2.4
CCM2-211ENST00000478582 WDR81Q562E7 1941 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 TREHO43280 583 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 C4orf19Q8IY42 314 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 HERVK_113Q902F9 699 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 DYDC2Q96IM9 177 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 RAB34Q9BZG1 259 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 RGL1Q9NZL6 768 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 ZDHHC9Q9Y397 364 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 CLIC4Q9Y696 253 aa30.03■■■□□ 2.4
CCM2-211ENST00000478582 MORC2Q9Y6X9 1032 aaPredicted RBP30.03■■■□□ 2.4
CCM2-211ENST00000478582 ZBTB42B2RXF5 422 aa30.02■■■□□ 2.4
CCM2-211ENST00000478582 RBL2Q08999 1139 aa30.02■■■□□ 2.4
CCM2-211ENST00000478582 PTPAQ15257 358 aa30.02■■■□□ 2.4
CCM2-211ENST00000478582 FOXD4L5Q5VV16 416 aaPredicted RBP30.02■■■□□ 2.4
CCM2-211ENST00000478582 FOXD4L4Q8WXT5 416 aaPredicted RBP30.02■■■□□ 2.4
CCM2-211ENST00000478582 LXNQ9BS40 222 aa30.02■■■□□ 2.4
CCM2-211ENST00000478582 NIFKQ9BYG3 293 aaKnown RBP30.02■■■□□ 2.4
CCM2-211ENST00000478582 ZSWIM4Q9H7M6 989 aa30.02■■■□□ 2.4
CCM2-211ENST00000478582 MTMR10Q9NXD2 777 aa30.02■■■□□ 2.4
CCM2-211ENST00000478582 MYH9P35579 1960 aaKnown RBP30.02■■■□□ 2.4
CCM2-211ENST00000478582 LYPLA2O95372 231 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 DDIT3P35638 169 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 CCDC155Q8N6L0 562 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 ERMNQ8TAM6 284 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 CAGE1Q8TC20 777 aa30.01■■■□□ 2.39
CCM2-211ENST00000478582 DHX38Q92620 1227 aaKnown RBP30.01■■■□□ 2.39
CCM2-211ENST00000478582 VWCEQ96DN2 955 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms