RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 FPGSQ05932 587 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 PPP2R5CQ13362 524 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 BFSP2Q13515 415 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 CCDC155Q8N6L0 562 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 AFAP1L1Q8TED9 768 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 DHX38Q92620 1227 aaKnown RBP7.76□□□□□ -1.17
BRCA1-215ENST00000478531 WNT8BQ93098 351 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 WNT8AQ9H1J5 351 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 TTC12Q9H892 705 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-215ENST00000478531 COLQQ9Y215 455 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-215ENST00000478531 NRCAMQ92823 1304 aa7.76□□□□□ -1.17
BRCA1-215ENST00000478531 POTEMA6NI47 508 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 CTSHP09668 335 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 OR52Z1P0C646 297 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 CSF2RAP15509 400 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 HOXC8P31273 242 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 THPOP40225 353 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 SLC26A2P50443 739 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 CYP4A11Q02928 519 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 PTK7Q13308 1070 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 FOXD4L5Q5VV16 416 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-215ENST00000478531 MFSD5Q6N075 450 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 RUFY4Q6ZNE9 571 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 SERINC5Q86VE9 423 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 TMEM199Q8N511 208 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 RETREG2Q8NC44 543 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 CAGE1Q8TC20 777 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 ATP8B4Q8TF62 1192 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 FOXD4L4Q8WXT5 416 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-215ENST00000478531 GDF15Q99988 308 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 SEPT9Q9UHD8 586 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-215ENST00000478531 PCDHA12Q9UN75 941 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 MAFBQ9Y5Q3 323 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-215ENST00000478531 CHD7Q9P2D1 2997 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 TMEM150BA6NC51 233 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 PITPNM1O00562 1244 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 STX6O43752 255 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 ZNF862O60290 1169 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 OATP04181 439 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 ACRP10323 421 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 CKBP12277 381 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 ATP4AP20648 1035 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 TECP42680 631 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 SPIRE1Q08AE8 756 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 PTGDRQ13258 359 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 RILPL1Q5EBL4 403 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 B3GNT9Q6UX72 402 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 BRAPQ7Z569 592 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 DEFB128Q7Z7B8 93 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 RDM1Q8NG50 284 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 BBXQ8WY36 941 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-215ENST00000478531 TNPO1Q92973 898 aaKnown RBP7.75□□□□□ -1.17
BRCA1-215ENST00000478531 FAM167AQ96KS9 214 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 MTMR9Q96QG7 549 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 SH2D3AQ9BRG2 576 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 LXNQ9BS40 222 aa7.75□□□□□ -1.17
BRCA1-215ENST00000478531 FAM49AQ9H0Q0 323 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-215ENST00000478531 TRANK1O15050 2925 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 RRN3P2A6NIE6 340 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 HBP1O60381 514 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 SELPP16109 830 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 EPHB4P54760 987 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 ORC2Q13416 577 aaPredicted RBP7.74□□□□□ -1.17
BRCA1-215ENST00000478531 PPIGQ13427 754 aaKnown RBP eCLIP7.74□□□□□ -1.172e-6■■■■□ 20.9
BRCA1-215ENST00000478531 CTTNQ14247 550 aaKnown RBP7.74□□□□□ -1.17
BRCA1-215ENST00000478531 BECN1Q14457 450 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 TMEM266Q2M3C6 531 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 MARCH8Q5T0T0 291 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 ZNF618Q5T7W0 954 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 LRRC8DQ7L1W4 858 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 DYDC2Q96IM9 177 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 RGL1Q9NZL6 768 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 MTMR6Q9Y217 621 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 GBF1Q92538 1859 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 MICAL3Q7RTP6 2002 aa7.74□□□□□ -1.17
BRCA1-215ENST00000478531 COL1A2P08123 1366 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 DDX11L8A8MPP1 907 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 ZBTB42B2RXF5 422 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 P4HBP07237 508 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 QARSP47897 775 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 PSMC5P62195 406 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 ADAM17P78536 824 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 TMEM62Q0P6H9 643 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 RESTQ13127 1097 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 TRIM71Q2Q1W2 868 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 MTERF2Q49AM1 385 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 ZNF484Q5JVG2 852 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 C9orf50Q5SZB4 431 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 PLA2G4FQ68DD2 849 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 FAM173BQ6P4H8 233 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 MTHFD1LQ6UB35 978 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 TPH2Q8IWU9 490 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 TDHQ8IZJ6 230 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 METTL13Q8N6R0 699 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 DNAJB3Q8WWF6 145 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 PPP1R16BQ96T49 567 aa7.73□□□□□ -1.17
BRCA1-215ENST00000478531 EIF2AK1Q9BQI3 630 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 FTOQ9C0B1 505 aaKnown RBP eCLIP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.73□□□□□ -1.17
BRCA1-215ENST00000478531 WRAP73Q9P2S5 460 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms