RNA–Protein interactions for RNA: ENST00000477939.1

TRA2B-211, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-211ENST00000477939 PTK7Q13308 1070 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 MAPRE1Q15691 268 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 KCNA10Q16322 511 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 FXNQ16595 210 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 PTPROQ16827 1216 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 LRRFIP1Q32MZ4 808 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 KCNV1Q6PIU1 500 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 KCTD1Q719H9 257 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 CEP57Q86XR8 500 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 ANKRD35Q8N283 1001 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 FAM133AQ8N9E0 248 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 NEK9Q8TD19 979 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 ATRIPQ8WXE1 791 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 MRRFQ96E11 262 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 THOC1Q96FV9 657 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 MRFAP1L1Q96HT8 127 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 TOX2Q96NM4 488 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 CDX2Q99626 313 aaPredicted RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 UPF3AQ9H1J1 476 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 VCX3BQ9H321 246 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 ABHD16BQ9H3Z7 469 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 ACAD9Q9H845 621 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 RNF146Q9NTX7 359 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 TMEM39AQ9NV64 488 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 SEL1LQ9UBV2 794 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 FBXO40Q9UH90 709 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 STX8Q9UNK0 236 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 LUC7L2Q9Y383 392 aaKnown RBP6.56□□□□□ -1.36
TRA2B-211ENST00000477939 GBF1Q92538 1859 aa6.56□□□□□ -1.36
TRA2B-211ENST00000477939 A0A087WUV0 522 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 A0A0D9SFI3 127 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 SOWAHBA6NEL2 793 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 TSPY2A6NKD2 308 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 TBCAO75347 108 aaKnown RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 STAM2O75886 525 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 RTN3O95197 1032 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 ASGR1P07306 291 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 SLC3A2P08195 630 aaKnown RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 CYP11B2P19099 503 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 NOVP48745 357 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 CSE1LP55060 971 aaKnown RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 GJA9P57773 515 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 SNAP25P60880 206 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 NKX3-2P78367 333 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 FPGSQ05932 587 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 NSUN2Q08J23 767 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 IKQ13123 557 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 CCDC38Q502W7 563 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 COBLL1Q53SF7 1204 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 FAM160B2Q86V87 743 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 MFN1Q8IWA4 741 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 BRSK2Q8IWQ3 736 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 FAM126BQ8IXS8 530 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 PAF1Q8N7H5 531 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 FAM81AQ8TBF8 368 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 NUP133Q8WUM0 1156 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 MAML1Q92585 1016 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 PPP1R14BQ96C90 147 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 LRRC45Q96CN5 670 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 SAAL1Q96ER3 474 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 FAM227BQ96M60 508 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 GLT1D1Q96MS3 346 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 SLC39A3Q9BRY0 314 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 TCHPQ9BT92 498 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 SEMA6BQ9H3T3 888 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 RGL1Q9NZL6 768 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 CFAP45Q9UL16 551 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 PRR12Q9ULL5 1215 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 N6AMT1Q9Y5N5 214 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 U3KPZ7 1027 aaPredicted RBP6.55□□□□□ -1.36
TRA2B-211ENST00000477939 MYO9BQ13459 2157 aa6.55□□□□□ -1.36
TRA2B-211ENST00000477939 ELP1O95163 1332 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 MROH7Q68CQ1 1323 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 DCDC2CA8MYV0 355 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 ORC4O43929 436 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 PLA2G6O60733 806 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 TIMP1P01033 207 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 MYL1P05976 194 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 FGRP09769 529 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 FDX1P10109 184 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 TGFB3P10600 412 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 ALAS1P13196 640 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 DNAJB2P25686 324 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 CDK7P50613 346 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 PDE1AP54750 535 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 SLC8A3P57103 927 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 BEX3Q00994 111 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 SLMAPQ14BN4 828 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 SUZ12Q15022 739 aaKnown RBP6.54□□□□□ -1.36
TRA2B-211ENST00000477939 LRRC23Q53EV4 343 aaPredicted RBP6.54□□□□□ -1.36
TRA2B-211ENST00000477939 TMEM63BQ5T3F8 832 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 RCSD1Q6JBY9 416 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 CPLX2Q6PUV4 134 aaKnown RBP6.54□□□□□ -1.36
TRA2B-211ENST00000477939 TLK2Q86UE8 772 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 ZNF589Q86UQ0 364 aaPredicted RBP6.54□□□□□ -1.36
TRA2B-211ENST00000477939 FBXO16Q8IX29 292 aaPredicted RBP6.54□□□□□ -1.36
TRA2B-211ENST00000477939 PARP9Q8IXQ6 854 aa6.54□□□□□ -1.36
TRA2B-211ENST00000477939 CCDC170Q8IYT3 715 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms