RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 COL1A2P08123 1366 aa24.64■■□□□ 1.53
COL9A3-211ENST00000477612 PRUNE2Q8WUY3 3088 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 BACH1O14867 736 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 LARGE1O95461 756 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 IGBP1P78318 339 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 NONOQ15233 471 aaKnown RBP eCLIP24.63■■□□□ 1.53
COL9A3-211ENST00000477612 PDXDC2PQ6P474 469 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 KRT25Q7Z3Z0 450 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 WASF1Q92558 559 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 UIMC1Q96RL1 719 aa24.63■■□□□ 1.53
COL9A3-211ENST00000477612 GAS2L1Q99501 681 aaPredicted RBP24.63■■□□□ 1.53
COL9A3-211ENST00000477612 ORC3Q9UBD5 711 aaPredicted RBP24.63■■□□□ 1.53
COL9A3-211ENST00000477612 UNC80Q8N2C7 3258 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 SMIM35A0A1B0GVV1 85 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 TLL1O43897 1013 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 PSAPP07602 524 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 TAP1Q03518 808 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 ZNF484Q5JVG2 852 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 MTHFD1LQ6UB35 978 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.62■■□□□ 1.53
COL9A3-211ENST00000477612 NME8Q8N427 588 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 NECAB1Q8N987 351 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 RAD9AQ99638 391 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 TCEAL9Q9UHQ7 104 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 SQORQ9Y6N5 450 aa24.62■■□□□ 1.53
COL9A3-211ENST00000477612 WDR64B1ANS9 1081 aa24.61■■□□□ 1.53
COL9A3-211ENST00000477612 PSMD10O75832 226 aa24.61■■□□□ 1.53
COL9A3-211ENST00000477612 ADGRE1Q14246 886 aa24.61■■□□□ 1.53
COL9A3-211ENST00000477612 B3GNT9Q6UX72 402 aa24.61■■□□□ 1.53
COL9A3-211ENST00000477612 NSUN7Q8NE18 718 aaKnown RBP24.61■■□□□ 1.53
COL9A3-211ENST00000477612 TRAPPC12Q8WVT3 735 aa24.61■■□□□ 1.53
COL9A3-211ENST00000477612 BBXQ8WY36 941 aaPredicted RBP24.61■■□□□ 1.53
COL9A3-211ENST00000477612 IFIH1Q9BYX4 1025 aaKnown RBP24.61■■□□□ 1.53
COL9A3-211ENST00000477612 GJB4Q9NTQ9 266 aa24.61■■□□□ 1.53
COL9A3-211ENST00000477612 ZBTB42B2RXF5 422 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 RBAK-RBAKDNI3L0D1 243 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 ARHGEF15O94989 841 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 TDP2O95551 362 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 MRPS6P82932 125 aaKnown RBP24.6■■□□□ 1.53
COL9A3-211ENST00000477612 LPIN1Q14693 890 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 FBXO47Q5MNV8 452 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 IER5Q5VY09 327 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 TMCO2Q7Z6W1 182 aaPredicted RBP24.6■■□□□ 1.53
COL9A3-211ENST00000477612 ZBTB10Q96DT7 871 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 DISC1Q9NRI5 854 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 CDY2AQ9Y6F7 541 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 TTC3P53804 2025 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 IGSF9BQ9UPX0 1349 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 KDM3AQ9Y4C1 1321 aa24.6■■□□□ 1.53
COL9A3-211ENST00000477612 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.59■■□□□ 1.53
COL9A3-211ENST00000477612 GAS7O60861 476 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 AMHP03971 560 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 POU3F3P20264 500 aaPredicted RBP24.59■■□□□ 1.53
COL9A3-211ENST00000477612 KLRC1P26715 233 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 SFNP31947 248 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 HTRA4P83105 476 aaPredicted RBP24.59■■□□□ 1.53
COL9A3-211ENST00000477612 INF2Q27J81 1249 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 LRCH2Q5VUJ6 765 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 RDM1Q8NG50 284 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 ETNPPLQ8TBG4 499 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 TOP1MTQ969P6 601 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 KIF2CQ99661 725 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 ZBED2Q9BTP6 218 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 TEKT3Q9BXF9 490 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 GABBR1Q9UBS5 961 aa24.59■■□□□ 1.53
COL9A3-211ENST00000477612 CCDC194A0A1B0GVG4 234 aa24.58■■□□□ 1.53
COL9A3-211ENST00000477612 DTNBO60941 627 aa24.58■■□□□ 1.53
COL9A3-211ENST00000477612 PPP4R3AQ6IN85 833 aa24.58■■□□□ 1.53
COL9A3-211ENST00000477612 USP38Q8NB14 1042 aa24.58■■□□□ 1.53
COL9A3-211ENST00000477612 UNC45AQ9H3U1 944 aa24.58■■□□□ 1.53
COL9A3-211ENST00000477612 INSL6Q9Y581 213 aa24.58■■□□□ 1.53
COL9A3-211ENST00000477612 TRPV2Q9Y5S1 764 aa24.58■■□□□ 1.53
COL9A3-211ENST00000477612 A0A0C4DFX4 3053 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 LCHNA4D1U4 455 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 GHRP10912 638 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 JAK3P52333 1124 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 ST3GAL1Q11201 340 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 TSHZ1Q6ZSZ6 1077 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 FAM43BQ6ZT52 329 aaPredicted RBP24.57■■□□□ 1.52
COL9A3-211ENST00000477612 NEK8Q86SG6 692 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 OXER1Q8TDS5 423 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 FAM49AQ9H0Q0 323 aaPredicted RBP24.57■■□□□ 1.52
COL9A3-211ENST00000477612 CEP131Q9UPN4 1083 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 LIMCH1Q9UPQ0 1083 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 SAMM50Q9Y512 469 aa24.57■■□□□ 1.52
COL9A3-211ENST00000477612 COL4A6Q14031 1691 aa24.56■■□□□ 1.52
COL9A3-211ENST00000477612 GCFC2P16383 781 aaKnown RBP24.56■■□□□ 1.52
COL9A3-211ENST00000477612 KIAA0319LQ8IZA0 1049 aa24.56■■□□□ 1.52
COL9A3-211ENST00000477612 MYOCDQ8IZQ8 938 aa24.56■■□□□ 1.52
COL9A3-211ENST00000477612 SP7Q8TDD2 431 aaPredicted RBP24.56■■□□□ 1.52
COL9A3-211ENST00000477612 TNFRSF25Q93038 417 aa24.56■■□□□ 1.52
COL9A3-211ENST00000477612 GJA10Q969M2 543 aa24.56■■□□□ 1.52
COL9A3-211ENST00000477612 FAM167AQ96KS9 214 aa24.56■■□□□ 1.52
COL9A3-211ENST00000477612 CELF4Q9BZC1 486 aaKnown RBP24.56■■□□□ 1.52
COL9A3-211ENST00000477612 AGO3Q9H9G7 860 aaKnown RBP24.56■■□□□ 1.52
COL9A3-211ENST00000477612 DDX25Q9UHL0 483 aaKnown RBP24.56■■□□□ 1.52
COL9A3-211ENST00000477612 M0QZ92 97 aa24.55■■□□□ 1.52
COL9A3-211ENST00000477612 ZNF862O60290 1169 aa24.55■■□□□ 1.52
COL9A3-211ENST00000477612 C22orf31O95567 290 aa24.55■■□□□ 1.52
COL9A3-211ENST00000477612 RBM25P49756 843 aaKnown RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms