RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 NBNO60934 754 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 SFNP31947 248 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 THPOP40225 353 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 TXKP42681 527 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 SLC26A2P50443 739 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 RBL2Q08999 1139 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 BFSP2Q13515 415 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 MBTPS1Q14703 1052 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 TCTN1Q2MV58 587 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 TMEM240Q5SV17 173 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 NCAPH2Q6IBW4 605 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 ZNF365Q70YC5 407 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 LRRC8DQ7L1W4 858 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 CKAP2LQ8IYA6 745 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 TDHQ8IZJ6 230 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 C4orf32Q8N8J7 132 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 RETREG2Q8NC44 543 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 CAGE1Q8TC20 777 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 INTS4Q96HW7 963 aaKnown RBP10.92□□□□□ -0.66
HDAC3-208ENST00000476739 SH2D3AQ9BRG2 576 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 TTC12Q9H892 705 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-208ENST00000476739 WRAP73Q9P2S5 460 aaPredicted RBP10.92□□□□□ -0.66
HDAC3-208ENST00000476739 TUBE1Q9UJT0 475 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 TRIOBPQ9H2D6 2365 aa10.92□□□□□ -0.66
HDAC3-208ENST00000476739 SIP14410 1827 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 POTEMA6NI47 508 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 SOX1O00570 391 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-208ENST00000476739 HBP1O60381 514 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 BAG4O95429 457 aaKnown RBP10.91□□□□□ -0.66
HDAC3-208ENST00000476739 CTSHP09668 335 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 GNAT1P11488 350 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 SELPP16109 830 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 SYT1P21579 422 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 PRKCEQ02156 737 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 PPIGQ13427 754 aaKnown RBP eCLIP10.91□□□□□ -0.664e-7■■□□□ 13.5
HDAC3-208ENST00000476739 MTHFD1LQ6UB35 978 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 HSCBQ8IWL3 235 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 SLFN12Q8IYM2 578 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 RDM1Q8NG50 284 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 DNAJB3Q8WWF6 145 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 BBXQ8WY36 941 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-208ENST00000476739 FAM49AQ9H0Q0 323 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-208ENST00000476739 IL23AQ9NPF7 189 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 RGL1Q9NZL6 768 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 EVPLQ92817 2033 aa10.91□□□□□ -0.66
HDAC3-208ENST00000476739 VPS37CA5D8V6 355 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-208ENST00000476739 RRN3P2A6NIE6 340 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 ZBTB39O15060 712 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 CHRNA1P02708 482 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 OATP04181 439 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 KLRC1P26715 233 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 TRAPPC10P48553 1259 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 CYP4A11Q02928 519 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 TMEM62Q0P6H9 643 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 CTTNQ14247 550 aaKnown RBP10.9□□□□□ -0.66
HDAC3-208ENST00000476739 EPHA7Q15375 998 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 OTOP2Q7RTS6 562 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 FERMT3Q86UX7 667 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 CCDC155Q8N6L0 562 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 DYDC2Q96IM9 177 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 CEP89Q96ST8 783 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.9□□□□□ -0.66
HDAC3-208ENST00000476739 CXXC1Q9P0U4 656 aaPredicted RBP10.9□□□□□ -0.66
HDAC3-208ENST00000476739 NOL7Q9UMY1 257 aaKnown RBP10.9□□□□□ -0.66
HDAC3-208ENST00000476739 PCDHA12Q9UN75 941 aa10.9□□□□□ -0.66
HDAC3-208ENST00000476739 A0A087WWV3 80 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 A0A1W2PPC1 479 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 RSPH10B2B2RC85 870 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 SLITRK3O94933 977 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 C22orf31O95567 290 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 CXCL10P02778 98 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 OR52Z1P0C646 297 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 RSPH10BP0C881 870 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 TECP42680 631 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 PSMC5P62195 406 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 MGAT3Q09327 533 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 PTGDRQ13258 359 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 IL17AQ16552 155 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 ZNF484Q5JVG2 852 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 RASIP1Q5U651 963 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 PLA2G4FQ68DD2 849 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 FAM109BQ6ICB4 259 aaPredicted RBP10.89□□□□□ -0.67
HDAC3-208ENST00000476739 TAF2Q6P1X5 1199 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 FAM173BQ6P4H8 233 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 ANO5Q75V66 913 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 RPAINQ86UA6 219 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 ZNF579Q8NAF0 562 aaKnown RBP10.89□□□□□ -0.67
HDAC3-208ENST00000476739 LRCH3Q96II8 777 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
HDAC3-208ENST00000476739 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 EIF2AK1Q9BQI3 630 aaKnown RBP10.89□□□□□ -0.67
HDAC3-208ENST00000476739 LXNQ9BS40 222 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 MTMR6Q9Y217 621 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 PCDHA2Q9Y5H9 948 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 LAMA3Q16787 3333 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 COL1A2P08123 1366 aa10.89□□□□□ -0.67
HDAC3-208ENST00000476739 LOXHD1Q8IVV2 1947 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 SMIM35A0A1B0GVV1 85 aa10.88□□□□□ -0.67
HDAC3-208ENST00000476739 FGBP02675 491 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms