RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 DDX41Q9UJV9 622 aaKnown RBP7.55□□□□□ -1.2
CLDN4-205ENST00000476494 LZTS1Q9Y250 596 aa7.55□□□□□ -1.2
CLDN4-205ENST00000476494 ZNF462Q96JM2 2506 aa7.55□□□□□ -1.2
CLDN4-205ENST00000476494 LAMA1P25391 3075 aa7.55□□□□□ -1.2
CLDN4-205ENST00000476494 PPFIA4O75335 1185 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 ICAM1P05362 532 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 ZFYP08048 801 aaPredicted RBP7.54□□□□□ -1.2
CLDN4-205ENST00000476494 TDGF1P13385 188 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 CHMLP26374 656 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 STARD6P59095 220 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 MGAT3Q09327 533 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 LPIN1Q14693 890 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 CSRP2Q16527 193 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 PAN2Q504Q3 1202 aaKnown RBP7.54□□□□□ -1.2
CLDN4-205ENST00000476494 PLPP4Q5VZY2 271 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 TSHZ3Q63HK5 1081 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 SLFN13Q68D06 897 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 ZSCAN25Q6NSZ9 544 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 CHST3Q7LGC8 479 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 FAM160B2Q86V87 743 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 DHX37Q8IY37 1157 aaKnown RBP7.54□□□□□ -1.2
CLDN4-205ENST00000476494 SLC44A3Q8N4M1 653 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 KBTBD3Q8NAB2 608 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 PPTC7Q8NI37 304 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 CHURC1Q8WUH1 139 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 RSAD2Q8WXG1 361 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 CEP95Q96GE4 821 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 GMCL1Q96IK5 515 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 DDX23Q9BUQ8 820 aaKnown RBP7.54□□□□□ -1.2
CLDN4-205ENST00000476494 FOXQ1Q9C009 403 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLDN4-205ENST00000476494 ARMT1Q9H993 441 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 DIAPH3Q9NSV4 1193 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 PAG1Q9NWQ8 432 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 HCSTQ9UBK5 93 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 PRR12Q9ULL5 1215 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 CA14Q9ULX7 337 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 TENM4Q6N022 2769 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 GREB1Q4ZG55 1949 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 KAT6AQ92794 2004 aa7.54□□□□□ -1.2
CLDN4-205ENST00000476494 ZNF532Q9HCE3 1301 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 TICRRQ7Z2Z1 1910 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 KCNK5O95279 499 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 TOP3BO95985 862 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 RETP07949 1114 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 GHRP10912 638 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 NCLP19338 710 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 RPS6P62753 249 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 PLCB3Q01970 1234 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 CSTF1Q05048 431 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 SLFNL1Q499Z3 407 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 ATAT1Q5SQI0 421 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 RARS2Q5T160 578 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 SLC9C2Q5TAH2 1124 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 XRRA1Q6P2D8 792 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 NPAS4Q8IUM7 802 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 MRPS27Q92552 414 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 AGO3Q9H9G7 860 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 TMEM260Q9NX78 707 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 ANKFY1Q9P2R3 1169 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 DBR1Q9UK59 544 aaKnown RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 GMEB2Q9UKD1 530 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 CCPG1Q9ULG6 757 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 MTF2Q9Y483 593 aaPredicted RBP7.53□□□□□ -1.2
CLDN4-205ENST00000476494 GPSM3Q9Y4H4 160 aa7.53□□□□□ -1.2
CLDN4-205ENST00000476494 C17orf102A2RUQ5 167 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 C2orf71A6NGG8 1288 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 GOLIM4O00461 696 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 CLASP2O75122 1294 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 SMIM10L2AP0DMW4 78 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 SMIM10L2BP0DMW5 78 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 SRFP11831 508 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 SPINK2P20155 84 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 CALML3P27482 149 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 MFAP1P55081 439 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 HSDL1Q3SXM5 330 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 FBXO47Q5MNV8 452 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 MYSM1Q5VVJ2 828 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 LAIR1Q6GTX8 287 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 OTOP3Q7RTS5 596 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 MRPL43Q8N983 215 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 COLGALT1Q8NBJ5 622 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 GPR152Q8TDT2 470 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 DNAJC2Q99543 621 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 HNRNPABQ99729 332 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 TCF25Q9BQ70 676 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 LSM14BQ9BX40 385 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 ADAM33Q9BZ11 813 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 RANBP17Q9H2T7 1088 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 CWH43Q9H720 699 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 NGRNQ9NPE2 291 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 ARHGEF3Q9NR81 526 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 HELLSQ9NRZ9 838 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 RBM19Q9Y4C8 960 aaKnown RBP7.52□□□□□ -1.21
CLDN4-205ENST00000476494 PCDHB12Q9Y5F1 795 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 SPTA1P02549 2419 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 PCNX2A6NKB5 2137 aa7.52□□□□□ -1.21
CLDN4-205ENST00000476494 HECTD1Q9ULT8 2610 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms