RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 OPA1O60313 960 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 FGGP02679 453 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 XRCC5P13010 732 aaKnown RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 NMT1P30419 496 aaKnown RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 CRKP46108 304 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 KCNA1Q09470 495 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 KIF22Q14807 665 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 BEND6Q5SZJ8 279 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 DAB2IPQ5VWQ8 1189 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 BSPRYQ5W0U4 402 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 AADACL2Q6P093 401 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 KCNK18Q7Z418 384 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 SGMS1Q86VZ5 419 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 SFR1Q86XK3 245 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 BANK1Q8NDB2 785 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 SPATA4Q8NEY3 305 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 OSBPL9Q96SU4 736 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 MTRQ99707 1265 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 ARMCX3Q9UH62 379 aaPredicted RBP5.45□□□□□ -1.54
CCDC39-204ENST00000476379 PLAAQ9Y263 795 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 DAGLAQ9Y4D2 1042 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 C5orf42Q9H799 3197 aa5.45□□□□□ -1.54
CCDC39-204ENST00000476379 LGALS16A8MUM7 142 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 GCOM1H8Y6P7 765 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 UPP2O95045 317 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 MYZAPP0CAP1 466 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 GNAQP50148 359 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 HERVK_113P62684 666 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 SEPT2Q15019 361 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 PFKFB3Q16875 520 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 NBPF12Q5TAG4 269 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 TRIM58Q8NG06 486 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 GLG1Q92896 1179 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ACSF2Q96CM8 615 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 PHF20Q9BVI0 1012 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 PPP1R12CQ9BZL4 782 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 TRIM9Q9C026 710 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 GCNT4Q9P109 453 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 JRKLQ9Y4A0 524 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 MRPL42Q9Y6G3 142 aaKnown RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 PIK3R2O00459 728 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 SKAP2O75563 359 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CCNE1P24864 410 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CIAPIN1Q6FI81 312 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 GBP6Q6ZN66 633 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 TBC1D1Q86TI0 1168 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 PANX2Q96RD6 677 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 FGFBP2Q9BYJ0 223 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ANKRD2Q9GZV1 360 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CICQ96RK0 1608 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 TISP43B9A030 160 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CYTH3O43739 400 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CTNND1O60716 968 aaKnown RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ALAS1P13196 640 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ATF7P17544 494 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 FGFR4P22455 802 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 GCLMP48507 274 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 MRPL12P52815 198 aaKnown RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ATP2C1P98194 919 aaPredicted RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 EXOC3L4Q17RC7 722 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ODR4Q5SWX8 454 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 FAM83BQ5T0W9 1011 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 SEPT14Q6ZU15 432 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 HS2ST1Q7LGA3 356 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 KRT25Q7Z3Z0 450 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 SRLQ86TD4 932 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 IFT20Q8IY31 132 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 FAM71BQ8TC56 605 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 KIFC3Q9BVG8 833 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 EMILIN3Q9NT22 766 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 DNM3Q9UQ16 869 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CNTNAP5Q8WYK1 1306 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CDHR2Q9BYE9 1310 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 MAP1BP46821 2468 aaKnown RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 POC1B-GALNT4F8VUJ3 575 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 MAP3K6O95382 1288 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 PLA2G4BP0C869 781 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 TNNC1P63316 161 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 IRX4P78413 519 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 RASA3Q14644 834 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 VWA3BQ502W6 1294 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ALKBH5Q6P6C2 394 aaKnown RBP5.44□□□□□ -1.54
CCDC39-204ENST00000476379 ISLR2Q6UXK2 745 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CCDC33Q8N5R6 958 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 TRIML1Q8N9V2 468 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 SLC30A5Q8TAD4 765 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 SHISA4Q96DD7 197 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 MTMR8Q96EF0 704 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 CD248Q9HCU0 757 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 STIM2Q9P246 746 aa5.44□□□□□ -1.54
CCDC39-204ENST00000476379 UTYO14607 1347 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 A0A087X0T9 212 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 TTI1O43156 1089 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 FAM228BP0C875 321 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 EPB41P11171 864 aaKnown RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 ITGA4P13612 1032 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 FGFR2P21802 821 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 USP14P54578 494 aa5.43□□□□□ -1.54
CCDC39-204ENST00000476379 MAGOHP61326 146 aaKnown RBP5.43□□□□□ -1.54
CCDC39-204ENST00000476379 PSMC6P62333 389 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms