RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PTK7Q13308 1070 aa33.16■■■□□ 2.9
HOXB3-208ENST00000476342 HIC1Q14526 733 aa33.16■■■□□ 2.9
HOXB3-208ENST00000476342 PDIA5Q14554 519 aa33.16■■■□□ 2.9
HOXB3-208ENST00000476342 DYDC2Q96IM9 177 aa33.16■■■□□ 2.9
HOXB3-208ENST00000476342 ZNF396Q96N95 335 aaPredicted RBP33.16■■■□□ 2.9
HOXB3-208ENST00000476342 TRIM43BA6NCK2 446 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 CYP2C9P11712 490 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 IGBP1P78318 339 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 ADAM17P78536 824 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 CYP4A11Q02928 519 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 XKR3Q5GH77 459 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 ZNF484Q5JVG2 852 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 CCDC155Q8N6L0 562 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 TRIM43Q96BQ3 446 aaPredicted RBP33.15■■■□□ 2.9
HOXB3-208ENST00000476342 ZSWIM4Q9H7M6 989 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 RGL1Q9NZL6 768 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 LRWD1Q9UFC0 647 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 TUBE1Q9UJT0 475 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 CLIC4Q9Y696 253 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 STK24Q9Y6E0 443 aa33.15■■■□□ 2.9
HOXB3-208ENST00000476342 TREHO43280 583 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 RAG1P15918 1043 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 HAUS3Q68CZ6 603 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 IGSF22Q8N9C0 903 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 CTAGE1Q96RT6 745 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 HSD17B14Q9BPX1 270 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 HIPK3Q9H422 1215 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 CEP290O15078 2479 aa33.14■■■□□ 2.9
HOXB3-208ENST00000476342 BFSP2Q13515 415 aa33.13■■■□□ 2.89
HOXB3-208ENST00000476342 SERINC5Q86VE9 423 aa33.13■■■□□ 2.89
HOXB3-208ENST00000476342 C4orf19Q8IY42 314 aa33.13■■■□□ 2.89
HOXB3-208ENST00000476342 CAGE1Q8TC20 777 aa33.13■■■□□ 2.89
HOXB3-208ENST00000476342 USP28Q96RU2 1077 aa33.13■■■□□ 2.89
HOXB3-208ENST00000476342 FTOQ9C0B1 505 aaKnown RBP eCLIP33.13■■■□□ 2.89
HOXB3-208ENST00000476342 MBLAC1A4D2B0 266 aaPredicted RBP33.12■■■□□ 2.89
HOXB3-208ENST00000476342 SLITRK3O94933 977 aa33.12■■■□□ 2.89
HOXB3-208ENST00000476342 CTTNQ14247 550 aaKnown RBP33.12■■■□□ 2.89
HOXB3-208ENST00000476342 TPH2Q8IWU9 490 aa33.12■■■□□ 2.89
HOXB3-208ENST00000476342 NOC4LQ9BVI4 516 aaKnown RBP33.12■■■□□ 2.89
HOXB3-208ENST00000476342 SEPT9Q9UHD8 586 aaPredicted RBP33.12■■■□□ 2.89
HOXB3-208ENST00000476342 LTBP2Q14767 1821 aa33.12■■■□□ 2.89
HOXB3-208ENST00000476342 VWA3AA6NCI4 1184 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 H0YGN5 161 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 TIMP1P01033 207 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 CEBPZQ03701 1054 aaKnown RBP33.11■■■□□ 2.89
HOXB3-208ENST00000476342 PPP1R12CQ9BZL4 782 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 TUFT1Q9NNX1 390 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 PTPAQ15257 358 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 IL17AQ16552 155 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 MARCH8Q5T0T0 291 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 TAF2Q6P1X5 1199 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 TRAPPC12Q8WVT3 735 aa33.11■■■□□ 2.89
HOXB3-208ENST00000476342 POLR3CQ9BUI4 534 aaPredicted RBP33.11■■■□□ 2.89
HOXB3-208ENST00000476342 PITPNM1O00562 1244 aa33.1■■■□□ 2.89
HOXB3-208ENST00000476342 NUCB2P80303 420 aa33.1■■■□□ 2.89
HOXB3-208ENST00000476342 ATL3Q6DD88 541 aa33.1■■■□□ 2.89
HOXB3-208ENST00000476342 LBHD1Q9BQE6 289 aaPredicted RBP33.1■■■□□ 2.89
HOXB3-208ENST00000476342 NIFKQ9BYG3 293 aaKnown RBP33.1■■■□□ 2.89
HOXB3-208ENST00000476342 WRAP73Q9P2S5 460 aaPredicted RBP33.1■■■□□ 2.89
HOXB3-208ENST00000476342 ZDHHC9Q9Y397 364 aa33.1■■■□□ 2.89
HOXB3-208ENST00000476342 ATP6V1DQ9Y5K8 247 aa33.1■■■□□ 2.89
HOXB3-208ENST00000476342 DDX11L8A8MPP1 907 aa33.09■■■□□ 2.89
HOXB3-208ENST00000476342 ZBTB42B2RXF5 422 aa33.09■■■□□ 2.89
HOXB3-208ENST00000476342 LYPLA2O95372 231 aa33.09■■■□□ 2.89
HOXB3-208ENST00000476342 RPA1P27694 616 aa33.09■■■□□ 2.89
HOXB3-208ENST00000476342 NASPP49321 788 aaPredicted RBP33.09■■■□□ 2.89
HOXB3-208ENST00000476342 KRT79Q5XKE5 535 aa33.09■■■□□ 2.89
HOXB3-208ENST00000476342 DHX38Q92620 1227 aaKnown RBP33.09■■■□□ 2.89
HOXB3-208ENST00000476342 MORC2Q9Y6X9 1032 aaPredicted RBP33.09■■■□□ 2.89
HOXB3-208ENST00000476342 STBD1O95210 358 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 MUTP22033 750 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 YWHABP31946 246 aaKnown RBP33.08■■■□□ 2.89
HOXB3-208ENST00000476342 RBL2Q08999 1139 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 FOXD4L6Q3SYB3 417 aaPredicted RBP33.08■■■□□ 2.89
HOXB3-208ENST00000476342 MTHFD1LQ6UB35 978 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 FOXD4L3Q6VB84 417 aaPredicted RBP33.08■■■□□ 2.89
HOXB3-208ENST00000476342 OTUD6AQ7L8S5 288 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 CATSPER3Q86XQ3 398 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 RETREG2Q8NC44 543 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 SNX29Q8TEQ0 813 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 AK8Q96MA6 479 aa33.08■■■□□ 2.89
HOXB3-208ENST00000476342 RPLP2P05387 115 aaKnown RBP33.07■■■□□ 2.88
HOXB3-208ENST00000476342 SPATA31C1P0DKV0 1188 aa33.07■■■□□ 2.88
HOXB3-208ENST00000476342 ITGB8P26012 769 aa33.07■■■□□ 2.88
HOXB3-208ENST00000476342 KLRC1P26715 233 aa33.07■■■□□ 2.88
HOXB3-208ENST00000476342 SLC39A14Q15043 492 aa33.07■■■□□ 2.88
HOXB3-208ENST00000476342 STK38Q15208 465 aa33.07■■■□□ 2.88
HOXB3-208ENST00000476342 ANO5Q75V66 913 aa33.07■■■□□ 2.88
HOXB3-208ENST00000476342 PCDHA2Q9Y5H9 948 aa33.07■■■□□ 2.88
HOXB3-208ENST00000476342 MAGEB2O15479 319 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 CAND2O75155 1236 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 MED24O75448 989 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 CYP2C18P33260 490 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 DDIT3P35638 169 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 CCT6AP40227 531 aaKnown RBP33.06■■■□□ 2.88
HOXB3-208ENST00000476342 MTERF2Q49AM1 385 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 MFSD5Q6N075 450 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 RSPH3Q86UC2 560 aa33.06■■■□□ 2.88
HOXB3-208ENST00000476342 TFIP11Q9UBB9 837 aaKnown RBP33.06■■■□□ 2.88
HOXB3-208ENST00000476342 CFAP45Q9UL16 551 aa33.06■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms