RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 STAT6P42226 847 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 ABL2P42684 1182 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 MAGEA9P43362 315 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 GTF2A2P52657 109 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 GYS2P54840 703 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 STK4Q13043 487 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 TUBB8Q3ZCM7 444 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 TMEM119Q4V9L6 283 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 GLE1Q53GS7 698 aaKnown RBP7.6□□□□□ -1.19
UBR4-212ENST00000475973 FKBP1CQ5VVH2 108 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 HGSNATQ68CP4 663 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 FBXO46Q6PJ61 603 aaPredicted RBP7.6□□□□□ -1.19
UBR4-212ENST00000475973 HHIPL2Q6UWX4 724 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 DZIP1Q86YF9 867 aaKnown RBP7.6□□□□□ -1.19
UBR4-212ENST00000475973 FAM114A1Q8IWE2 563 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 IQCKQ8N0W5 287 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 STAG2Q8N3U4 1231 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 RNF10Q8N5U6 811 aaKnown RBP7.6□□□□□ -1.19
UBR4-212ENST00000475973 KIAA0895Q8NCT3 520 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 TRIM58Q8NG06 486 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.6□□□□□ -1.19
UBR4-212ENST00000475973 MARVELD3Q96A59 401 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 OPTNQ96CV9 577 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 CLMNQ96JQ2 1002 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 WRNIP1Q96S55 665 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 NUP88Q99567 741 aaPredicted RBP7.6□□□□□ -1.19
UBR4-212ENST00000475973 TMEM39BQ9GZU3 492 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 RIOX1Q9H6W3 641 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 NHEJ1Q9H9Q4 299 aaPredicted RBP7.6□□□□□ -1.19
UBR4-212ENST00000475973 ELP3Q9H9T3 547 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 STK17AQ9UEE5 414 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 TMEM59LQ9UK28 342 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 NENFQ9UMX5 172 aa7.6□□□□□ -1.19
UBR4-212ENST00000475973 RRP15Q9Y3B9 282 aaKnown RBP7.6□□□□□ -1.19
UBR4-212ENST00000475973 ATAD5Q96QE3 1844 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 IGKV6D-41A0A0C4DH26 115 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 RNF40O75150 1001 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 USP2O75604 605 aaPredicted RBP7.59□□□□□ -1.19
UBR4-212ENST00000475973 RHOXF2BP0C7M4 288 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 CYP2D6P10635 497 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 TCP1P17987 556 aaKnown RBP7.59□□□□□ -1.19
UBR4-212ENST00000475973 ATP2B1P20020 1258 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 RASA1P20936 1047 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 RGS19P49795 217 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 CACNB3P54284 484 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 LRRC63Q05C16 580 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 PSMD2Q13200 908 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 GRB10Q13322 594 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 STIM1Q13586 685 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 VGLL4Q14135 290 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 SEPT2Q15019 361 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 ARHGEF6Q15052 776 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 GRIK5Q16478 980 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 CCDC122Q5T0U0 273 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 ALS2CLQ60I27 953 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 APOBEC3HQ6NTF7 200 aaKnown RBP7.59□□□□□ -1.19
UBR4-212ENST00000475973 EMBQ6PCB8 327 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 GBP6Q6ZN66 633 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 UNC13DQ70J99 1090 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 KRT25Q7Z3Z0 450 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 PNMA1Q8ND90 353 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 NEDD1Q8NHV4 660 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.59□□□□□ -1.19
UBR4-212ENST00000475973 JAKMIP2Q96AA8 810 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 ZFRQ96KR1 1074 aaKnown RBP7.59□□□□□ -1.19
UBR4-212ENST00000475973 CNOT6LQ96LI5 555 aaKnown RBP7.59□□□□□ -1.19
UBR4-212ENST00000475973 TEPSINQ96N21 525 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 PNMA5Q96PV4 448 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 RHOXF2Q9BQY4 288 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 ZSWIM4Q9H7M6 989 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 GDF3Q9NR23 364 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 TOMM22Q9NS69 142 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 ZNHIT6Q9NWK9 470 aaKnown RBP7.59□□□□□ -1.19
UBR4-212ENST00000475973 VPS18Q9P253 973 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 HDAC6Q9UBN7 1215 aa7.59□□□□□ -1.19
UBR4-212ENST00000475973 MYH8P13535 1937 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 GRIN2DO15399 1336 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 FRMD3A2A2Y4 597 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 PP2D1A8MPX8 630 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 CFAP99D6REC4 459 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 IGF2BP3O00425 579 aaKnown RBP eCLIP7.58□□□□□ -1.2
UBR4-212ENST00000475973 OR52Z1P0C646 297 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 PLCG1P19174 1290 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 PRDX5P30044 214 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 UBA7P41226 1012 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 LMAN1P49257 510 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 SOX10P56693 466 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 TFAP4Q01664 338 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 KCNMA1Q12791 1236 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 MAN2A1Q16706 1144 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 VWA3BQ502W6 1294 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 FAM47AQ5JRC9 791 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 SPTY2D1Q68D10 685 aaPredicted RBP7.58□□□□□ -1.2
UBR4-212ENST00000475973 FOXR1Q6PIV2 292 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 CCDC84Q86UT8 332 aaPredicted RBP7.58□□□□□ -1.2
UBR4-212ENST00000475973 CABP7Q86V35 215 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 CSGALNACT2Q8N6G5 542 aa7.58□□□□□ -1.2
UBR4-212ENST00000475973 SPATA4Q8NEY3 305 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms