RNA–Protein interactions for RNA: ENST00000475684.2

CCHCR1-212, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 786 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-212ENST00000475684 CEP250Q9BV73 2442 aa11.68□□□□□ -0.54
CCHCR1-212ENST00000475684 MYH7P12883 1935 aa11.68□□□□□ -0.54
CCHCR1-212ENST00000475684 TTC3P53804 2025 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 NRCAMQ92823 1304 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 TBKBP1A7MCY6 615 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 M0R2C6 588 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 NARSO43776 548 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 TGFB3P10600 412 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 TOP1P11387 765 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 KANK3Q6NY19 840 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 ITPRIPQ8IWB1 547 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 BORCS6Q96GS4 357 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 NAPBQ9H115 298 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 BCAS3Q9H6U6 928 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 TBC1D17Q9HA65 648 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 ANGPTL2Q9UKU9 493 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 ZNF215Q9UL58 517 aaPredicted RBP11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 CA14Q9ULX7 337 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 SIT1Q9Y3P8 196 aa11.67□□□□□ -0.54
CCHCR1-212ENST00000475684 RNF113AO15541 343 aaKnown RBP11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 PDHBP11177 359 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 CTDSPL2Q05D32 466 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 ZNF543Q08ER8 600 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 UTP14CQ5TAP6 766 aaKnown RBP11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 ZKSCAN2Q63HK3 967 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 OTOP3Q7RTS5 596 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 DLGAP2Q9P1A6 1054 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 HCSTQ9UBK5 93 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.66□□□□□ -0.54
CCHCR1-212ENST00000475684 POTEMA6NI47 508 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 SPTLC1O15269 473 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 CLASP2O75122 1294 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 CFBP00751 764 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 LAG3P18627 525 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 CA8P35219 290 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 SARSP49591 514 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 MRPS6P82932 125 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 KRT17Q04695 432 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 SMC1AQ14683 1233 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 FAM102BQ5T8I3 360 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 TRIM50Q86XT4 487 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 MRPL43Q8N983 215 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 GPKOWQ92917 476 aaPredicted RBP eCLIP11.65□□□□□ -0.545e-9■■■■□ 21.7
CCHCR1-212ENST00000475684 ZFP91Q96JP5 570 aaPredicted RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 GPR20Q99678 358 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 PDCD2LQ9BRP1 358 aa11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 MRPL11Q9Y3B7 192 aaKnown RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 ANKRD11Q6UB99 2663 aaPredicted RBP11.65□□□□□ -0.54
CCHCR1-212ENST00000475684 SPEGQ15772 3267 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 GOLGA8HP0CJ92 632 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 PAK2Q13177 524 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 CDC37Q16543 378 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 ZNF528Q3MIS6 628 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 IER5Q5VY09 327 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 CYFIP1Q7L576 1253 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 VSIG10LQ86VR7 867 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 FTSJ3Q8IY81 847 aaKnown RBP11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 MAML2Q8IZL2 1156 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 ATRIPQ8WXE1 791 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 UBA5Q9GZZ9 404 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 CPVLQ9H3G5 476 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 CWH43Q9H720 699 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 DZANK1Q9NVP4 752 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 IGSF9Q9P2J2 1179 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 ZBTB47Q9UFB7 747 aaPredicted RBP11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 SQORQ9Y6N5 450 aa11.64□□□□□ -0.55
CCHCR1-212ENST00000475684 OTOGLQ3ZCN5 2332 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 C2orf71A6NGG8 1288 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 RAB11FIP3O75154 756 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 ZFYP08048 801 aaPredicted RBP11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 TGM1P22735 817 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 PGM5Q15124 567 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 PHLDB3Q6NSJ2 640 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 TMC5Q6UXY8 1006 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 CCDC149Q6ZUS6 474 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 TMEM87AQ8NBN3 555 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 TOMM22Q9NS69 142 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 TUBE1Q9UJT0 475 aa11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 SMG5Q9UPR3 1016 aaKnown RBP11.63□□□□□ -0.55
CCHCR1-212ENST00000475684 FRYQ5TBA9 3013 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 M0QZ92 97 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 SLC30A4O14863 429 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 CXCL14O95715 111 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 PROS1P07225 676 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 PDE4AP27815 886 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 CCND2P30279 289 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 TMEM62Q0P6H9 643 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 PPFIA1Q13136 1202 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 NEDD9Q14511 834 aa11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
CCHCR1-212ENST00000475684 KCNT2Q6UVM3 1135 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms