RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 AXDND1Q5T1B0 1012 aaPredicted RBP24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 KRT79Q5XKE5 535 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 SLC39A5Q6ZMH5 540 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 TPH2Q8IWU9 490 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 C4orf19Q8IY42 314 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 CKAP2LQ8IYA6 745 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 FAM167AQ96KS9 214 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 GDPD2Q9HCC8 539 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 PCDHA7Q9UN72 937 aa24.85■■□□□ 1.57
MCF2L2-209ENST00000475664 ALPK3Q96L96 1907 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 POTEB3A0JP26 581 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 ARVCFO00192 962 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 SMIM10L2AP0DMW4 78 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 SMIM10L2BP0DMW5 78 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 CDK7P50613 346 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 ATN1P54259 1190 aaPredicted RBP24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 PTPN11Q06124 597 aaPredicted RBP24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 SPECC1Q5M775 1068 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 C1orf53Q5VUE5 145 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 POTEBQ6S5H4 581 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 ZNF579Q8NAF0 562 aaKnown RBP24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 BBXQ8WY36 941 aaPredicted RBP24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 SEZ6LQ9BYH1 1024 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 HDAC6Q9UBN7 1215 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 TRPC6Q9Y210 931 aa24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 TRIP12Q14669 1992 aaPredicted RBP24.84■■□□□ 1.57
MCF2L2-209ENST00000475664 HBP1O60381 514 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 MUTP22033 750 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 HOXC8P31273 242 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 ECM1Q16610 540 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 XKR3Q5GH77 459 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 HYIQ5T013 277 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 USP49Q70CQ1 688 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 CABP7Q86V35 215 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 C7orf31Q8N865 590 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 CCSER1Q9C0I3 900 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 GTF2IRD1Q9UHL9 959 aa24.83■■□□□ 1.57
MCF2L2-209ENST00000475664 SLC26A4O43511 780 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 UBA7P41226 1012 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 PPFIA1Q13136 1202 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 FAM47CQ5HY64 1035 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 POTEGQ6S5H5 508 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 SYMPKQ92797 1274 aaKnown RBP24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 EPSTI1Q96J88 318 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 LOXHD1Q8IVV2 1947 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 KDM3AQ9Y4C1 1321 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 DNAH12Q6ZR08 3092 aa24.82■■□□□ 1.56
MCF2L2-209ENST00000475664 ZBTB42B2RXF5 422 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 INSRRP14616 1297 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 HIC1Q14526 733 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 LRRC26Q2I0M4 334 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 SHC4Q6S5L8 630 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 ANO5Q75V66 913 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 TRMT1LQ7Z2T5 733 aaKnown RBP24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 PNMA5Q96PV4 448 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 NIFKQ9BYG3 293 aaKnown RBP24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 NRBP2Q9NSY0 501 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 SETD4Q9NVD3 440 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 SEPT9Q9UHD8 586 aaPredicted RBP24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 NRCAMQ92823 1304 aa24.81■■□□□ 1.56
MCF2L2-209ENST00000475664 COL1A2P08123 1366 aa24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 TMEM150BA6NC51 233 aa24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 DDX11L8A8MPP1 907 aa24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 YWHABP31946 246 aaKnown RBP24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 ADAM17P78536 824 aa24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 GRB10Q13322 594 aa24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 GRIK4Q16099 956 aa24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 GDF6Q6KF10 455 aaPredicted RBP24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 LMBR1Q8WVP7 490 aa24.8■■□□□ 1.56
MCF2L2-209ENST00000475664 C17orf102A2RUQ5 167 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 ZBTB39O15060 712 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 RTP1P59025 263 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 TARBP2Q15633 366 aaKnown RBP24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 TRIM60Q495X7 471 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 TMEM119Q4V9L6 283 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 ZNF484Q5JVG2 852 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 PLA2G4FQ68DD2 849 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 ADALQ6DHV7 355 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 CLEC17AQ6ZS10 378 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 ANKRD33Q7Z3H0 272 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 FAM126BQ8IXS8 530 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 NACC1Q96RE7 527 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 ANKEF1Q9NU02 776 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 DDX19AQ9NUU7 478 aaKnown RBP24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 KIAA1024Q9UPX6 916 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 MROH7Q68CQ1 1323 aa24.79■■□□□ 1.56
MCF2L2-209ENST00000475664 RRN3P2A6NIE6 340 aa24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 XRCC6P12956 609 aaKnown RBP eCLIP24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 TXLNAP40222 546 aa24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 KARSQ15046 597 aaKnown RBP24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 ZRSR1Q15695 479 aaKnown RBP24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 PIGOQ8TEQ8 1089 aa24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 TRAPPC12Q8WVT3 735 aa24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 CALML4Q96GE6 196 aa24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 CEP89Q96ST8 783 aa24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 NT5C3AQ9H0P0 336 aa24.78■■□□□ 1.56
MCF2L2-209ENST00000475664 A0A087WWV3 80 aa24.77■■□□□ 1.56
MCF2L2-209ENST00000475664 B4GALT4O60513 344 aa24.77■■□□□ 1.56
MCF2L2-209ENST00000475664 PQBP1O60828 265 aaKnown RBP24.77■■□□□ 1.56
MCF2L2-209ENST00000475664 GNAT1P11488 350 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms