RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ZNF746Q6NUN9 644 aaPredicted RBP11.33□□□□□ -0.6
PCCB-213ENST00000475214 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.33□□□□□ -0.6
PCCB-213ENST00000475214 VSTM4Q8IW00 320 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 CSGALNACT2Q8N6G5 542 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 BANK1Q8NDB2 785 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 HPS3Q969F9 1004 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 MS4A4AQ96JQ5 239 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 SENP7Q9BQF6 1050 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 SRRTQ9BXP5 876 aaKnown RBP11.33□□□□□ -0.6
PCCB-213ENST00000475214 MROH8Q9H579 483 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 RBPJLQ9UBG7 517 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 TRIM17Q9Y577 477 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 COL4A3BPQ9Y5P4 624 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 NFASCO94856 1347 aa11.33□□□□□ -0.6
PCCB-213ENST00000475214 ARHGEF35A5YM69 484 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 LRRC10BA6NIK2 292 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 SPATA31C2B4DYI2 1134 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 NRDCO43847 1150 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 ATP9AO75110 1047 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 FAM13AO94988 1023 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 LYPLA2O95372 231 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 ICAM3P32942 547 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 PMS1P54277 932 aaKnown RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 PSMC5P62195 406 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 CNTN2Q02246 1040 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 CACNB1Q02641 598 aaPredicted RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 KCTD2Q14681 263 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 KIF22Q14807 665 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 TAF1CQ15572 869 aaPredicted RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 ANKRD23Q86SG2 305 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 CREBRFQ8IUR6 639 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 LRRC8AQ8IWT6 810 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 SMAP1Q8IYB5 467 aaPredicted RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 CCDC150Q8NCX0 1101 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 SHCBP1Q8NEM2 672 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 SMCR8Q8TEV9 937 aaPredicted RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 DUSP9Q99956 384 aaKnown RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 REEP2Q9BRK0 252 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 EFCC1Q9HA90 598 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 DBR1Q9UK59 544 aaKnown RBP11.32□□□□□ -0.6
PCCB-213ENST00000475214 PDE4DIPQ5VU43 2346 aa11.32□□□□□ -0.6
PCCB-213ENST00000475214 SOWAHBA6NEL2 793 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 PDHXO00330 501 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 N4BP3O15049 544 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 PEX10O60683 326 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 PSAPP07602 524 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 KCNA2P16389 499 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 COPB1P53618 953 aaKnown RBP11.31□□□□□ -0.6
PCCB-213ENST00000475214 ERVK-9P63128 1117 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 ERVK-24P63145 666 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 CCNA1P78396 465 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 KRT31Q15323 416 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 LRRC41Q15345 812 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 Q3C1V9 767 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 SPECC1LQ69YQ0 1117 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 C1orf186Q6ZWK4 172 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 C4orf19Q8IY42 314 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 FAM133AQ8N9E0 248 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 GPRC5AQ8NFJ5 357 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 CACTINQ8WUQ7 758 aaKnown RBP11.31□□□□□ -0.6
PCCB-213ENST00000475214 BRI3BPQ8WY22 251 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 CCDC43Q96MW1 224 aaKnown RBP11.31□□□□□ -0.6
PCCB-213ENST00000475214 MMP19Q99542 508 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 PTPN18Q99952 460 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 RUSC1Q9BVN2 902 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 SEMA6BQ9H3T3 888 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 R3HDMLQ9H3Y0 253 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 TXNRD2Q9NNW7 524 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
PCCB-213ENST00000475214 RRAGDQ9NQL2 400 aaPredicted RBP11.31□□□□□ -0.6
PCCB-213ENST00000475214 TBC1D7Q9P0N9 293 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 SEL1LQ9UBV2 794 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 SLC9A2Q9UBY0 812 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 ODF2LQ9ULJ1 636 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 PCDHA2Q9Y5H9 948 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
PCCB-213ENST00000475214 BTBD19C9JJ37 291 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 ZNF500O60304 480 aaPredicted RBP11.3□□□□□ -0.6
PCCB-213ENST00000475214 RGS20O76081 388 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 CCNE2O96020 404 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 CYP2C8P10632 490 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 SFPQP23246 707 aaKnown RBP eCLIP11.3□□□□□ -0.6
PCCB-213ENST00000475214 EDNRBP24530 442 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 GUCY2CP25092 1073 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 GCLCP48506 637 aaPredicted RBP11.3□□□□□ -0.6
PCCB-213ENST00000475214 WDR78Q5VTH9 848 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 MIS18BP1Q6P0N0 1132 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 OTUD6AQ7L8S5 288 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
PCCB-213ENST00000475214 SFR1Q86XK3 245 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 MYCT1Q8N699 235 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 ATP6V0A1Q93050 837 aa11.3□□□□□ -0.6
PCCB-213ENST00000475214 VPS16Q9H269 839 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms