RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 MARK3P27448 753 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 QARSP47897 775 aaKnown RBP19.04■□□□□ 0.64
SCAF11-206ENST00000474828 PSMC5P62195 406 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 ZNF200P98182 395 aaPredicted RBP19.04■□□□□ 0.64
SCAF11-206ENST00000474828 PPFIA1Q13136 1202 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 ZNF484Q5JVG2 852 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 MFSD5Q6N075 450 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 TRAF7Q6Q0C0 670 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 FERMT3Q86UX7 667 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 C4orf19Q8IY42 314 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 ZMYND8Q9ULU4 1186 aaPredicted RBP19.04■□□□□ 0.64
SCAF11-206ENST00000474828 SAMM50Q9Y512 469 aa19.04■□□□□ 0.64
SCAF11-206ENST00000474828 TREHO43280 583 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 OATP04181 439 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 HSP90AA1P07900 732 aaKnown RBP19.03■□□□□ 0.64
SCAF11-206ENST00000474828 CYP2C9P11712 490 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 DDIT3P35638 169 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 IL17AQ16552 155 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 XKR3Q5GH77 459 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 WNT8BQ93098 351 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 VWCEQ96DN2 955 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 WNT8AQ9H1J5 351 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 HIPK3Q9H422 1215 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 WRAP73Q9P2S5 460 aaPredicted RBP19.03■□□□□ 0.64
SCAF11-206ENST00000474828 PRKAG2Q9UGJ0 569 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 PCDHA2Q9Y5H9 948 aa19.03■□□□□ 0.64
SCAF11-206ENST00000474828 MARCH6O60337 910 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 DKC1O60832 514 aaKnown RBP eCLIP19.02■□□□□ 0.64
SCAF11-206ENST00000474828 RPLP2P05387 115 aaKnown RBP19.02■□□□□ 0.64
SCAF11-206ENST00000474828 ZSCAN22P10073 491 aaPredicted RBP19.02■□□□□ 0.64
SCAF11-206ENST00000474828 RAG1P15918 1043 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 SYN1P17600 705 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 MUTP22033 750 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 PRKCEQ02156 737 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 BFSP2Q13515 415 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 PTPAQ15257 358 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 TAF2Q6P1X5 1199 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 LINC01465Q8N7H1 131 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 EIF2AK1Q9BQI3 630 aaKnown RBP19.02■□□□□ 0.64
SCAF11-206ENST00000474828 POLR3CQ9BUI4 534 aaPredicted RBP19.02■□□□□ 0.64
SCAF11-206ENST00000474828 NRBP2Q9NSY0 501 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 CEP131Q9UPN4 1083 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 PPME1Q9Y570 386 aa19.02■□□□□ 0.64
SCAF11-206ENST00000474828 UMODL1Q5DID0 1318 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 BRD1O95696 1058 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 SPATA31C1P0DKV0 1188 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 MAGEA10P43363 369 aaPredicted RBP19.01■□□□□ 0.63
SCAF11-206ENST00000474828 FXR1P51114 621 aaKnown RBP eCLIP19.01■□□□□ 0.63
SCAF11-206ENST00000474828 FAM26DQ5JW98 314 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 ANO5Q75V66 913 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 CCDC155Q8N6L0 562 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 ZSWIM4Q9H7M6 989 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 PRDM5Q9NQX1 630 aaPredicted RBP19.01■□□□□ 0.63
SCAF11-206ENST00000474828 TUBE1Q9UJT0 475 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 TRPC6Q9Y210 931 aa19.01■□□□□ 0.63
SCAF11-206ENST00000474828 IGKV6-21A0A0C4DH24 114 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 SMIM35A0A1B0GVV1 85 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 POTEMA6NI47 508 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 PARNO95453 639 aaKnown RBP19■□□□□ 0.63
SCAF11-206ENST00000474828 C22orf31O95567 290 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 CKBP12277 381 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 XRCC6P12956 609 aaKnown RBP eCLIP19■□□□□ 0.63
SCAF11-206ENST00000474828 RPA1P27694 616 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 TECP42680 631 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 CHMP4BP1P59074 171 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 PKP1Q13835 747 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 GPNMBQ14956 572 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 NCAPH2Q6IBW4 605 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 MTHFD1LQ6UB35 978 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 BANK1Q8NDB2 785 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 BADQ92934 168 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 DYDC2Q96IM9 177 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 LXNQ9BS40 222 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 TUFT1Q9NNX1 390 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 RGL1Q9NZL6 768 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 NOD1Q9Y239 953 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 ZDHHC9Q9Y397 364 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 STK24Q9Y6E0 443 aa19■□□□□ 0.63
SCAF11-206ENST00000474828 MYH9P35579 1960 aaKnown RBP18.99■□□□□ 0.63
SCAF11-206ENST00000474828 F13A1P00488 732 aa18.99■□□□□ 0.63
SCAF11-206ENST00000474828 IQCF3P0C7M6 154 aa18.99■□□□□ 0.63
SCAF11-206ENST00000474828 SELPP16109 830 aa18.99■□□□□ 0.63
SCAF11-206ENST00000474828 CYP2C18P33260 490 aa18.99■□□□□ 0.63
SCAF11-206ENST00000474828 RFC2P35250 354 aa18.99■□□□□ 0.63
SCAF11-206ENST00000474828 NASPP49321 788 aaPredicted RBP18.99■□□□□ 0.63
SCAF11-206ENST00000474828 SF3A1Q15459 793 aaKnown RBP18.99■□□□□ 0.63
SCAF11-206ENST00000474828 DTHD1Q6ZMT9 781 aa18.99■□□□□ 0.63
SCAF11-206ENST00000474828 TRIP12Q14669 1992 aaPredicted RBP18.99■□□□□ 0.63
SCAF11-206ENST00000474828 TANC1Q9C0D5 1861 aa18.99■□□□□ 0.63
SCAF11-206ENST00000474828 MAGEB2O15479 319 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 CXCL10P02778 98 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 KLRC1P26715 233 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 TMEM266Q2M3C6 531 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 ATL3Q6DD88 541 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 FAM173BQ6P4H8 233 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 CHRDL2Q6WN34 429 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 RUFY4Q6ZNE9 571 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 C16orf59Q7L2K0 433 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 CATSPER3Q86XQ3 398 aa18.98■□□□□ 0.63
SCAF11-206ENST00000474828 NME8Q8N427 588 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms