RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 TRIM43Q96BQ3 446 aaPredicted RBP11.81□□□□□ -0.52
COPS6-208ENST00000474823 ZNF396Q96N95 335 aaPredicted RBP11.81□□□□□ -0.52
COPS6-208ENST00000474823 EIF2AK1Q9BQI3 630 aaKnown RBP11.81□□□□□ -0.52
COPS6-208ENST00000474823 PPP1R12CQ9BZL4 782 aa11.81□□□□□ -0.52
COPS6-208ENST00000474823 TUBE1Q9UJT0 475 aa11.81□□□□□ -0.52
COPS6-208ENST00000474823 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
COPS6-208ENST00000474823 MYH9P35579 1960 aaKnown RBP11.81□□□□□ -0.52
COPS6-208ENST00000474823 KAT6AQ92794 2004 aa11.81□□□□□ -0.52
COPS6-208ENST00000474823 COL1A2P08123 1366 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 ATP4AP20648 1035 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 HOXC8P31273 242 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 CTTNQ14247 550 aaKnown RBP11.8□□□□□ -0.52
COPS6-208ENST00000474823 PDIA5Q14554 519 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 SF3A1Q15459 793 aaKnown RBP11.8□□□□□ -0.52
COPS6-208ENST00000474823 UGCGQ16739 394 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 ARL6IP4Q66PJ3 421 aaKnown RBP11.8□□□□□ -0.52
COPS6-208ENST00000474823 HAUS3Q68CZ6 603 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 TAF2Q6P1X5 1199 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 FAM173BQ6P4H8 233 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 RSPH3Q86UC2 560 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 TMEM199Q8N511 208 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 DYDC2Q96IM9 177 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 LXNQ9BS40 222 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 NOC4LQ9BVI4 516 aaKnown RBP11.8□□□□□ -0.52
COPS6-208ENST00000474823 ZSWIM4Q9H7M6 989 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 RGL1Q9NZL6 768 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 LRWD1Q9UFC0 647 aa11.8□□□□□ -0.52
COPS6-208ENST00000474823 SEPT9Q9UHD8 586 aaPredicted RBP11.8□□□□□ -0.52
COPS6-208ENST00000474823 VWA3AA6NCI4 1184 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 ZNF862O60290 1169 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
COPS6-208ENST00000474823 CYP2C18P33260 490 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 ADAM17P78536 824 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 MDM2Q00987 491 aaPredicted RBP11.79□□□□□ -0.52
COPS6-208ENST00000474823 CEBPZQ03701 1054 aaKnown RBP11.79□□□□□ -0.52
COPS6-208ENST00000474823 HIC1Q14526 733 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 PRPF38BQ5VTL8 546 aaKnown RBP11.79□□□□□ -0.52
COPS6-208ENST00000474823 KRT79Q5XKE5 535 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 OTUD6AQ7L8S5 288 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 SERINC5Q86VE9 423 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 C4orf19Q8IY42 314 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 TRAPPC12Q8WVT3 735 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 BADQ92934 168 aa11.79□□□□□ -0.52
COPS6-208ENST00000474823 CCDC43Q96MW1 224 aaKnown RBP11.79□□□□□ -0.52
COPS6-208ENST00000474823 MBLAC1A4D2B0 266 aaPredicted RBP11.78□□□□□ -0.52
COPS6-208ENST00000474823 MAGEB2O15479 319 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 CAND2O75155 1236 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 SLITRK3O94933 977 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 KLRC1P26715 233 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
COPS6-208ENST00000474823 THPOP40225 353 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
COPS6-208ENST00000474823 MAGEA10P43363 369 aaPredicted RBP11.78□□□□□ -0.52
COPS6-208ENST00000474823 CCL23P55773 120 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 FPGSQ05932 587 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 TBC1D8BQ0IIM8 1120 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 PPIGQ13427 754 aaKnown RBP eCLIP11.78□□□□□ -0.52
COPS6-208ENST00000474823 PKP1Q13835 747 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 MTERF2Q49AM1 385 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 MARCH8Q5T0T0 291 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 MFSD5Q6N075 450 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 MTHFD1LQ6UB35 978 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 CTAGE1Q96RT6 745 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 USP28Q96RU2 1077 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 HSD17B14Q9BPX1 270 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 POLR3CQ9BUI4 534 aaPredicted RBP11.78□□□□□ -0.52
COPS6-208ENST00000474823 NIFKQ9BYG3 293 aaKnown RBP11.78□□□□□ -0.52
COPS6-208ENST00000474823 TUFT1Q9NNX1 390 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 PCDHA2Q9Y5H9 948 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 ATP6V1DQ9Y5K8 247 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 CLIC4Q9Y696 253 aa11.78□□□□□ -0.52
COPS6-208ENST00000474823 SMIM35A0A1B0GVV1 85 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 M0QZ92 97 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 LYPLA2O95372 231 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 PARNO95453 639 aaKnown RBP11.77□□□□□ -0.53
COPS6-208ENST00000474823 BRD1O95696 1058 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 CKBP12277 381 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 SELPP16109 830 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 MUTP22033 750 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 ITGB8P26012 769 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 RPA1P27694 616 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 TMOD1P28289 359 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 NUCB2P80303 420 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 RBL2Q08999 1139 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 STK38Q15208 465 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.53
COPS6-208ENST00000474823 ATL3Q6DD88 541 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.53
COPS6-208ENST00000474823 RUFY4Q6ZNE9 571 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 LRRC8DQ7L1W4 858 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 CATSPER3Q86XQ3 398 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 EXOC8Q8IYI6 725 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 METTL13Q8N6R0 699 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 DNAJB3Q8WWF6 145 aa11.77□□□□□ -0.53
COPS6-208ENST00000474823 DHX38Q92620 1227 aaKnown RBP11.77□□□□□ -0.53
COPS6-208ENST00000474823 CEP170P1Q96L14 293 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms