RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 BBXQ8WY36 941 aaPredicted RBP17.67■□□□□ 0.42
COL1A1-204ENST00000474644 HSD17B14Q9BPX1 270 aa17.67■□□□□ 0.42
COL1A1-204ENST00000474644 RAB34Q9BZG1 259 aa17.67■□□□□ 0.42
COL1A1-204ENST00000474644 LRWD1Q9UFC0 647 aa17.67■□□□□ 0.42
COL1A1-204ENST00000474644 TBX21Q9UL17 535 aa17.67■□□□□ 0.42
COL1A1-204ENST00000474644 NOD1Q9Y239 953 aa17.67■□□□□ 0.42
COL1A1-204ENST00000474644 HBP1O60381 514 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 STBD1O95210 358 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 ADAM17P78536 824 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 NUCB2P80303 420 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 CTTNQ14247 550 aaKnown RBP17.66■□□□□ 0.42
COL1A1-204ENST00000474644 PDIA5Q14554 519 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 SLC39A14Q15043 492 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 XKR3Q5GH77 459 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 TRMT1LQ7Z2T5 733 aaKnown RBP17.66■□□□□ 0.42
COL1A1-204ENST00000474644 SH3RF1Q7Z6J0 888 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 ERMNQ8TAM6 284 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 TRAPPC12Q8WVT3 735 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 TNPO1Q92973 898 aaKnown RBP17.66■□□□□ 0.42
COL1A1-204ENST00000474644 PRDM5Q9NQX1 630 aaPredicted RBP17.66■□□□□ 0.42
COL1A1-204ENST00000474644 MORC2Q9Y6X9 1032 aaPredicted RBP17.66■□□□□ 0.42
COL1A1-204ENST00000474644 COL1A2P08123 1366 aa17.66■□□□□ 0.42
COL1A1-204ENST00000474644 TRIM43BA6NCK2 446 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 PP2D1A8MPX8 630 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 ZBTB42B2RXF5 422 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 TREHO43280 583 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 DKC1O60832 514 aaKnown RBP eCLIP17.65■□□□□ 0.42
COL1A1-204ENST00000474644 MED24O75448 989 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 SLITRK3O94933 977 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 SPATA31C1P0DKV0 1188 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 GNAT1P11488 350 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 CYP2C9P11712 490 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 IGBP1P78318 339 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 DNM1Q05193 864 aaKnown RBP17.65■□□□□ 0.42
COL1A1-204ENST00000474644 MARCH8Q5T0T0 291 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 HAUS3Q68CZ6 603 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 SERINC5Q86VE9 423 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 TPH2Q8IWU9 490 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 C4orf19Q8IY42 314 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 TRIM43Q96BQ3 446 aaPredicted RBP17.65■□□□□ 0.42
COL1A1-204ENST00000474644 ZSWIM4Q9H7M6 989 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 TMEM39AQ9NV64 488 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 TFIP11Q9UBB9 837 aaKnown RBP17.65■□□□□ 0.42
COL1A1-204ENST00000474644 SEPT9Q9UHD8 586 aaPredicted RBP17.65■□□□□ 0.42
COL1A1-204ENST00000474644 TUBE1Q9UJT0 475 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 FBXO2Q9UK22 296 aaPredicted RBP17.65■□□□□ 0.42
COL1A1-204ENST00000474644 NR2E3Q9Y5X4 410 aa17.65■□□□□ 0.42
COL1A1-204ENST00000474644 DNAH12Q6ZR08 3092 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 MBLAC1A4D2B0 266 aaPredicted RBP17.64■□□□□ 0.41
COL1A1-204ENST00000474644 TMEM150BA6NC51 233 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 RRN3P2A6NIE6 340 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 KIAA0355O15063 1070 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 LYPLA2O95372 231 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
COL1A1-204ENST00000474644 GRIN1Q05586 938 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 PTK7Q13308 1070 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 STK38Q15208 465 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 ZNF484Q5JVG2 852 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 CATSPER3Q86XQ3 398 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 LINC00301Q8NCQ3 95 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 SNX29Q8TEQ0 813 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 DHX38Q92620 1227 aaKnown RBP17.64■□□□□ 0.41
COL1A1-204ENST00000474644 ZBTB10Q96DT7 871 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 POLR3CQ9BUI4 534 aaPredicted RBP17.64■□□□□ 0.41
COL1A1-204ENST00000474644 TUFT1Q9NNX1 390 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 NRBP2Q9NSY0 501 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 PCDH10Q9P2E7 1040 aa17.64■□□□□ 0.41
COL1A1-204ENST00000474644 ZMYND8Q9ULU4 1186 aaPredicted RBP17.64■□□□□ 0.41
COL1A1-204ENST00000474644 YEATS4O95619 227 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 SYN1P17600 705 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 RPA1P27694 616 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 CDC25AP30304 524 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 YWHABP31946 246 aaKnown RBP17.63■□□□□ 0.41
COL1A1-204ENST00000474644 CCT6AP40227 531 aaKnown RBP17.63■□□□□ 0.41
COL1A1-204ENST00000474644 PLA2G4FQ68DD2 849 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 RUFY4Q6ZNE9 571 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 ANO5Q75V66 913 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 WNT8BQ93098 351 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 CHAMP1Q96JM3 812 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 AK8Q96MA6 479 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 NOC4LQ9BVI4 516 aaKnown RBP17.63■□□□□ 0.41
COL1A1-204ENST00000474644 NIFKQ9BYG3 293 aaKnown RBP17.63■□□□□ 0.41
COL1A1-204ENST00000474644 PRKAG2Q9UGJ0 569 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 CIZ1Q9ULV3 898 aaPredicted RBP17.63■□□□□ 0.41
COL1A1-204ENST00000474644 ATP6V1DQ9Y5K8 247 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
COL1A1-204ENST00000474644 STK24Q9Y6E0 443 aa17.63■□□□□ 0.41
COL1A1-204ENST00000474644 DDX11L8A8MPP1 907 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 SPTLC2O15270 562 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 C22orf31O95567 290 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 LONP1P36776 959 aaKnown RBP17.62■□□□□ 0.41
COL1A1-204ENST00000474644 TARBP2Q15633 366 aaKnown RBP17.62■□□□□ 0.41
COL1A1-204ENST00000474644 TRIM71Q2Q1W2 868 aaKnown RBP17.62■□□□□ 0.41
COL1A1-204ENST00000474644 MTERF2Q49AM1 385 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 KRT79Q5XKE5 535 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 POTEGQ6S5H5 508 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 MTHFD1LQ6UB35 978 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 SH2D3AQ9BRG2 576 aa17.62■□□□□ 0.41
COL1A1-204ENST00000474644 MMTAG2Q9BU76 263 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms