RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CYTH3O43739 400 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 CHRNA1P02708 482 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 MMP1P03956 469 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 RPLP2P05387 115 aaKnown RBP7.95□□□□□ -1.14
CKS1B-205ENST00000473344 MARK3P27448 753 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 IRS1P35568 1242 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 LTBRP36941 435 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 NHLH1Q02575 133 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 NUCB1Q02818 461 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 HYAL1Q12794 435 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 PPFIA1Q13136 1202 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 COL19A1Q14993 1142 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 SMAD2Q15796 467 aaKnown RBP7.95□□□□□ -1.14
CKS1B-205ENST00000473344 CTC1Q2NKJ3 1217 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 IER5Q5VY09 327 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 PCNX4Q63HM2 1172 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 XRRA1Q6P2D8 792 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 HFE2Q6ZVN8 426 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 SMC5Q8IY18 1101 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 CTCFLQ8NI51 663 aaPredicted RBP7.95□□□□□ -1.14
CKS1B-205ENST00000473344 TNPO1Q92973 898 aaKnown RBP7.95□□□□□ -1.14
CKS1B-205ENST00000473344 RRP36Q96EU6 259 aaKnown RBP7.95□□□□□ -1.14
CKS1B-205ENST00000473344 FBXL18Q96ME1 805 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 SENP7Q9BQF6 1050 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 PLVAPQ9BX97 442 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 OSBPL7Q9BZF2 842 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 MUTYHQ9UIF7 546 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 TUBE1Q9UJT0 475 aa7.95□□□□□ -1.14
CKS1B-205ENST00000473344 TRIP12Q14669 1992 aaPredicted RBP7.95□□□□□ -1.14
CKS1B-205ENST00000473344 LAMA4Q16363 1823 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 ENPP3O14638 875 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 RRP9O43818 475 aaKnown RBP7.94□□□□□ -1.14
CKS1B-205ENST00000473344 KIF5BP33176 963 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 IGBP1P78318 339 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 ADAM17P78536 824 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 DLX2Q07687 328 aaPredicted RBP7.94□□□□□ -1.14
CKS1B-205ENST00000473344 TROAPQ12815 778 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 SMAD4Q13485 552 aaKnown RBP7.94□□□□□ -1.14
CKS1B-205ENST00000473344 MTMR1Q13613 665 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 LPIN1Q14693 890 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 GRIK4Q16099 956 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 HERC4Q5GLZ8 1057 aaPredicted RBP7.94□□□□□ -1.14
CKS1B-205ENST00000473344 USP17L6PQ6QN14 398 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 Q6ZNB5 142 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 RUFY4Q6ZNE9 571 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 TSHZ1Q6ZSZ6 1077 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 RNF135Q8IUD6 432 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 NCOA7Q8NI08 942 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 DNAJB3Q8WWF6 145 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 RUFY2Q8WXA3 655 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 SEPT1Q8WYJ6 367 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 CLP1Q92989 425 aaKnown RBP7.94□□□□□ -1.14
CKS1B-205ENST00000473344 FTHL17Q9BXU8 183 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 SMARCAD1Q9H4L7 1026 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 EHMT1Q9H9B1 1298 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 ALG13Q9NP73 1137 aaKnown RBP7.94□□□□□ -1.14
CKS1B-205ENST00000473344 CD207Q9UJ71 328 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 FRMPD4Q14CM0 1322 aa7.94□□□□□ -1.14
CKS1B-205ENST00000473344 NCOR1O75376 2440 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 RRN3P2A6NIE6 340 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 SPDYE3A6NKU9 549 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 E7EWF7 191 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 LINC01565O15544 149 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 TBX10O75333 385 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 DGKIO75912 1065 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 CYP21A2P08686 494 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 STAG3L1P0CL83 205 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 MGAT3Q09327 533 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 PAK2Q13177 524 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 NAALADL2Q58DX5 795 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 FBXO47Q5MNV8 452 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 SPOUT1Q5T280 376 aaKnown RBP7.93□□□□□ -1.14
CKS1B-205ENST00000473344 L1TD1Q5T7N2 865 aaKnown RBP7.93□□□□□ -1.14
CKS1B-205ENST00000473344 SUGP1Q8IWZ8 645 aaKnown RBP7.93□□□□□ -1.14
CKS1B-205ENST00000473344 DDX12PQ92771 950 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 EDAQ92838 391 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 P2RX5Q93086 422 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 ZNF689Q96CS4 500 aaPredicted RBP7.93□□□□□ -1.14
CKS1B-205ENST00000473344 GPRASP2Q96D09 838 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 FAM49AQ9H0Q0 323 aaPredicted RBP7.93□□□□□ -1.14
CKS1B-205ENST00000473344 AZI2Q9H6S1 392 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 PSTPIP2Q9H939 334 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 PKD2L1Q9P0L9 805 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 LRFN2Q9ULH4 789 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 PLAGL2Q9UPG8 496 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 TELO2Q9Y4R8 837 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 CDY2AQ9Y6F7 541 aa7.93□□□□□ -1.14
CKS1B-205ENST00000473344 MEIS2O14770 477 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 MAFGO15525 162 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 MAP3K7O43318 606 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 ATP9AO75110 1047 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 PPFIA3O75145 1194 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 IGHDP01880 384 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 LINC00271P0C7V0 271 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 KCNA2P16389 499 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 IBSPP21815 317 aaPredicted RBP7.92□□□□□ -1.14
CKS1B-205ENST00000473344 CD52P31358 61 aa7.92□□□□□ -1.14
CKS1B-205ENST00000473344 GTF2F1P35269 517 aaKnown RBP eCLIP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms