RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 CAGE1Q8TC20 777 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 HSD17B14Q9BPX1 270 aa23.33■■□□□ 1.33
TOP3A-204ENST00000472959 EIF2AK1Q9BQI3 630 aaKnown RBP23.33■■□□□ 1.33
TOP3A-204ENST00000472959 MBLAC1A4D2B0 266 aaPredicted RBP23.32■■□□□ 1.32
TOP3A-204ENST00000472959 PITPNM1O00562 1244 aa23.32■■□□□ 1.32
TOP3A-204ENST00000472959 TREHO43280 583 aa23.32■■□□□ 1.32
TOP3A-204ENST00000472959 TAF2Q6P1X5 1199 aa23.32■■□□□ 1.32
TOP3A-204ENST00000472959 ERMNQ8TAM6 284 aa23.32■■□□□ 1.32
TOP3A-204ENST00000472959 ZSWIM4Q9H7M6 989 aa23.32■■□□□ 1.32
TOP3A-204ENST00000472959 TUBE1Q9UJT0 475 aa23.32■■□□□ 1.32
TOP3A-204ENST00000472959 STK24Q9Y6E0 443 aa23.32■■□□□ 1.32
TOP3A-204ENST00000472959 POTEMA6NI47 508 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 SLITRK3O94933 977 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 ITGB8P26012 769 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 IGBP1P78318 339 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 RBL2Q08999 1139 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 SF3A1Q15459 793 aaKnown RBP23.31■■□□□ 1.32
TOP3A-204ENST00000472959 MARCH8Q5T0T0 291 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 PRPF38BQ5VTL8 546 aaKnown RBP23.31■■□□□ 1.32
TOP3A-204ENST00000472959 C4orf19Q8IY42 314 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 RETREG2Q8NC44 543 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 LXNQ9BS40 222 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 NIFKQ9BYG3 293 aaKnown RBP23.31■■□□□ 1.32
TOP3A-204ENST00000472959 PPP1R12CQ9BZL4 782 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 RGL1Q9NZL6 768 aa23.31■■□□□ 1.32
TOP3A-204ENST00000472959 TNRC18O15417 2968 aaPredicted RBP23.31■■□□□ 1.32
TOP3A-204ENST00000472959 F13A1P00488 732 aa23.3■■□□□ 1.32
TOP3A-204ENST00000472959 RPLP2P05387 115 aaKnown RBP23.3■■□□□ 1.32
TOP3A-204ENST00000472959 ANP32AP39687 249 aaKnown RBP23.3■■□□□ 1.32
TOP3A-204ENST00000472959 MFSD5Q6N075 450 aa23.3■■□□□ 1.32
TOP3A-204ENST00000472959 FAM173BQ6P4H8 233 aa23.3■■□□□ 1.32
TOP3A-204ENST00000472959 TPH2Q8IWU9 490 aa23.3■■□□□ 1.32
TOP3A-204ENST00000472959 IGSF22Q8N9C0 903 aa23.3■■□□□ 1.32
TOP3A-204ENST00000472959 DHX38Q92620 1227 aaKnown RBP23.3■■□□□ 1.32
TOP3A-204ENST00000472959 DYDC2Q96IM9 177 aa23.3■■□□□ 1.32
TOP3A-204ENST00000472959 ZNF396Q96N95 335 aaPredicted RBP23.3■■□□□ 1.32
TOP3A-204ENST00000472959 LRWD1Q9UFC0 647 aa23.3■■□□□ 1.32
TOP3A-204ENST00000472959 DDX11L8A8MPP1 907 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 ZBTB42B2RXF5 422 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 CAND2O75155 1236 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 STBD1O95210 358 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 LYPLA2O95372 231 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 CYP2C18P33260 490 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 CYP4A11Q02928 519 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 PKP1Q13835 747 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 IL17AQ16552 155 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 TRIM71Q2Q1W2 868 aaKnown RBP23.29■■□□□ 1.32
TOP3A-204ENST00000472959 TRMT1LQ7Z2T5 733 aaKnown RBP23.29■■□□□ 1.32
TOP3A-204ENST00000472959 RPAINQ86UA6 219 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 TMEM199Q8N511 208 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 BADQ92934 168 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 POLR3CQ9BUI4 534 aaPredicted RBP23.29■■□□□ 1.32
TOP3A-204ENST00000472959 TUFT1Q9NNX1 390 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 PCDHA2Q9Y5H9 948 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 CLIC4Q9Y696 253 aa23.29■■□□□ 1.32
TOP3A-204ENST00000472959 MAGEB2O15479 319 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 BRD1O95696 1058 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 KLRC1P26715 233 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 MAGEA10P43363 369 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-204ENST00000472959 CTTNQ14247 550 aaKnown RBP23.28■■□□□ 1.32
TOP3A-204ENST00000472959 FOXD4L5Q5VV16 416 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-204ENST00000472959 HAUS3Q68CZ6 603 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 MTHFD1LQ6UB35 978 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 OTUD6AQ7L8S5 288 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 TRAPPC12Q8WVT3 735 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 FOXD4L4Q8WXT5 416 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-204ENST00000472959 WRAP73Q9P2S5 460 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-204ENST00000472959 SEPT9Q9UHD8 586 aaPredicted RBP23.28■■□□□ 1.32
TOP3A-204ENST00000472959 PPME1Q9Y570 386 aa23.28■■□□□ 1.32
TOP3A-204ENST00000472959 CKBP12277 381 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 SELPP16109 830 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 MUTP22033 750 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 RPA1P27694 616 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 YWHABP31946 246 aaKnown RBP23.27■■□□□ 1.32
TOP3A-204ENST00000472959 THPOP40225 353 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 MDM2Q00987 491 aaPredicted RBP23.27■■□□□ 1.32
TOP3A-204ENST00000472959 PTPAQ15257 358 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 TARBP2Q15633 366 aaKnown RBP23.27■■□□□ 1.32
TOP3A-204ENST00000472959 ANO5Q75V66 913 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 RSPH3Q86UC2 560 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 GDF15Q99988 308 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 WNT8AQ9H1J5 351 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 DAXXQ9UER7 740 aaPredicted RBP23.27■■□□□ 1.32
TOP3A-204ENST00000472959 MORC2Q9Y6X9 1032 aaPredicted RBP23.27■■□□□ 1.32
TOP3A-204ENST00000472959 UMODL1Q5DID0 1318 aa23.27■■□□□ 1.32
TOP3A-204ENST00000472959 SMIM35A0A1B0GVV1 85 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 VWA3AA6NCI4 1184 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 PARNO95453 639 aaKnown RBP23.26■■□□□ 1.31
TOP3A-204ENST00000472959 SPATA31C1P0DKV0 1188 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 XRCC6P12956 609 aaKnown RBP eCLIP23.26■■□□□ 1.31
TOP3A-204ENST00000472959 FPGSQ05932 587 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 ATL3Q6DD88 541 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 RUFY4Q6ZNE9 571 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 CATSPER3Q86XQ3 398 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 WNT8BQ93098 351 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 AK8Q96MA6 479 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 USP28Q96RU2 1077 aa23.26■■□□□ 1.31
TOP3A-204ENST00000472959 FTOQ9C0B1 505 aaKnown RBP eCLIP23.26■■□□□ 1.31
TOP3A-204ENST00000472959 C22orf31O95567 290 aa23.25■■□□□ 1.31
TOP3A-204ENST00000472959 IQCF3P0C7M6 154 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms