RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 TBX3O15119 743 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 PSMD10O75832 226 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 LETM1O95202 739 aaPredicted RBP11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 OR52Z1P0C646 297 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 SMIM10L2AP0DMW4 78 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 SMIM10L2BP0DMW5 78 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 CMA1P23946 247 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 MARCKSP29966 332 aaPredicted RBP11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 SFNP31947 248 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 TXLNAP40222 546 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 CDK7P50613 346 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 IGBP1P78318 339 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 ATP2C1P98194 919 aaPredicted RBP11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 PTGISQ16647 500 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 TMEM266Q2M3C6 531 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 NCAPH2Q6IBW4 605 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 ABHD15Q6UXT9 468 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 DTHD1Q6ZMT9 781 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 ANKRD33Q7Z3H0 272 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 FAM126BQ8IXS8 530 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 SLC43A3Q8NBI5 491 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 HAS1Q92839 578 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 TOX2Q96NM4 488 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 PCYT2Q99447 389 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 FTOQ9C0B1 505 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 KCNMB3Q9NPA1 279 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 ERAP1Q9NZ08 941 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 GABBR1Q9UBS5 961 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 TCHHQ07283 1943 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 SCN10AQ9Y5Y9 1956 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 EMSYQ7Z589 1322 aa11.85□□□□□ -0.51
SMARCD3-208ENST00000472789 MYH15Q9Y2K3 1946 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 HAS3O00219 553 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 B4GALT4O60513 344 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 LGR5O75473 907 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 ATG7O95352 703 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 CYP2C9P11712 490 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 RAG1P15918 1043 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 ZNF200P98182 395 aaPredicted RBP11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 PTPN11Q06124 597 aaPredicted RBP11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 FAAP100Q0VG06 881 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 PPFIA1Q13136 1202 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 GDF6Q6KF10 455 aaPredicted RBP11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 SH3RF1Q7Z6J0 888 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 CCDC60Q8IWA6 550 aaPredicted RBP11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 MRPS27Q92552 414 aaKnown RBP11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 LBHD1Q9BQE6 289 aaPredicted RBP11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 PPP1R12CQ9BZL4 782 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 TMEM60Q9H2L4 133 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 RNPEPQ9H4A4 650 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 TTC12Q9H892 705 aaPredicted RBP11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 PDLIM7Q9NR12 457 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 SETD4Q9NVD3 440 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 PCDHA12Q9UN75 941 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 STK24Q9Y6E0 443 aa11.84□□□□□ -0.51
SMARCD3-208ENST00000472789 MUC3AQ02505 3323 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 POTEB3A0JP26 581 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 TRIM43BA6NCK2 446 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 GADD45BO75293 160 aaPredicted RBP11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 GNAT1P11488 350 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 BMP8BP34820 402 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 LONP1P36776 959 aaKnown RBP11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 PLCB4Q15147 1175 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 POTEBQ6S5H4 581 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 Q7L0L9 218 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 PLPPR4Q7Z2D5 763 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 BANK1Q8NDB2 785 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 ATP6V0A1Q93050 837 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 TRIM43Q96BQ3 446 aaPredicted RBP11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 AK8Q96MA6 479 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 DDX19AQ9NUU7 478 aaKnown RBP11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 GTF2IRD1Q9UHL9 959 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 HOOK1Q9UJC3 728 aaKnown RBP11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 VAV3Q9UKW4 847 aa11.83□□□□□ -0.52
SMARCD3-208ENST00000472789 EML1O00423 815 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 INSRRP14616 1297 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 TECP42680 631 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 SLC26A2P50443 739 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 MDM2Q00987 491 aaPredicted RBP11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 FAM160A1Q05DH4 1040 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 PPP2R5CQ13362 524 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 PDIA5Q14554 519 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 GRIK4Q16099 956 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 UGCGQ16739 394 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 TPRNQ4KMQ1 711 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 SESTD1Q86VW0 696 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 DEFB123Q8N688 67 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 FSIP1Q8NA03 581 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 RDM1Q8NG50 284 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 AFAP1L1Q8TED9 768 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 MTMR9Q96QG7 549 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 HIPK3Q9H422 1215 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 FBXO2Q9UK22 296 aaPredicted RBP11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 NRCAMQ92823 1304 aa11.82□□□□□ -0.52
SMARCD3-208ENST00000472789 IGKV6D-21A0A0A0MT36 114 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 VWA3AA6NCI4 1184 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 POTEMA6NI47 508 aa11.81□□□□□ -0.52
SMARCD3-208ENST00000472789 KIAA0355O15063 1070 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms