RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 NT5C2P49902 561 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 GATMP50440 423 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 ANTXR2P58335 489 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 NUCB1Q02818 461 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 PTH1RQ03431 593 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 NEDD9Q14511 834 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 RBM23Q86U06 439 aaKnown RBP10.77□□□□□ -0.69
VCL-204ENST00000472585 ASIC4Q96FT7 647 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 PCYT2Q99447 389 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 MRPL42Q9Y6G3 142 aaKnown RBP10.77□□□□□ -0.69
VCL-204ENST00000472585 GVINP1Q7Z2Y8 2422 aa10.77□□□□□ -0.69
VCL-204ENST00000472585 MYO15AQ9UKN7 3530 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 MBLAC1A4D2B0 266 aaPredicted RBP10.76□□□□□ -0.69
VCL-204ENST00000472585 FIBPO43427 364 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 ITGB1P05556 798 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 CYP21A2P08686 494 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 NBL1P41271 181 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 NRIP1P48552 1158 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 RBM10P98175 930 aaKnown RBP10.76□□□□□ -0.69
VCL-204ENST00000472585 PTPN21Q16825 1174 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 FBXO47Q5MNV8 452 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 SPPL3Q8TCT6 385 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 IGDCC4Q8TDY8 1250 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 DNAJB3Q8WWF6 145 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 P2RX5Q93086 422 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 NKD2Q969F2 451 aaPredicted RBP10.76□□□□□ -0.69
VCL-204ENST00000472585 RIPOR3Q96MK2 946 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 SENP7Q9BQF6 1050 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 CNNM2Q9H8M5 875 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 DIAPH3Q9NSV4 1193 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 BARX2Q9UMQ3 279 aaPredicted RBP10.76□□□□□ -0.69
VCL-204ENST00000472585 MYO10Q9HD67 2058 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 VPS13AQ96RL7 3174 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 NRCAMQ92823 1304 aa10.76□□□□□ -0.69
VCL-204ENST00000472585 TTC3P53804 2025 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 GLP2RO95838 553 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 KCNA2P16389 499 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 ATF7P17544 494 aaPredicted RBP10.75□□□□□ -0.69
VCL-204ENST00000472585 ITGB5P18084 799 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 CD52P31358 61 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 TCF7P36402 384 aaPredicted RBP10.75□□□□□ -0.69
VCL-204ENST00000472585 GNPTABQ3T906 1256 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 NAALADL2Q58DX5 795 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 PCNX4Q63HM2 1172 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 MCTP2Q6DN12 878 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 VN1R2Q8NFZ6 395 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 MICAL1Q8TDZ2 1067 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 TMX1Q9H3N1 280 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 CDY2AQ9Y6F7 541 aa10.75□□□□□ -0.69
VCL-204ENST00000472585 KIAA1671Q9BY89 1806 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 ZNF292O60281 2723 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 DCHS1Q96JQ0 3298 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 FSD2A1L4K1 749 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 IFIT3O14879 490 aaKnown RBP10.74□□□□□ -0.69
VCL-204ENST00000472585 STAM2O75886 525 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 GSPT1P15170 499 aaKnown RBP10.74□□□□□ -0.69
VCL-204ENST00000472585 MARK3P27448 753 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 PDE4AP27815 886 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 GRIK4Q16099 956 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 ADSSL1Q8N142 457 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 CMTR1Q8N1G2 835 aaKnown RBP10.74□□□□□ -0.69
VCL-204ENST00000472585 KLHL23Q8NBE8 558 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 MYL10Q9BUA6 226 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 TLE6Q9H808 572 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 LAMA4Q16363 1823 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 DOCK5Q9H7D0 1870 aa10.74□□□□□ -0.69
VCL-204ENST00000472585 E7EWF7 191 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 PIK3CDO00329 1044 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 PLEKHA8P1O95397 391 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 PDGFBP01127 241 aaPredicted RBP10.73□□□□□ -0.69
VCL-204ENST00000472585 SRGAP2BP0DMP2 458 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 INSRRP14616 1297 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 TMEM62Q0P6H9 643 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 PPFIA1Q13136 1202 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 TAF2Q6P1X5 1199 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 FRMD5Q7Z6J6 570 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 TRAPPC12Q8WVT3 735 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 POF1BQ8WVV4 589 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 SEPT1Q8WYJ6 367 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 NEK1Q96PY6 1258 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 MFRPQ9BY79 579 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 CDHR5Q9HBB8 845 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 HCSTQ9UBK5 93 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 ZNF215Q9UL58 517 aaPredicted RBP10.73□□□□□ -0.69
VCL-204ENST00000472585 PADI3Q9ULW8 664 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 UBIAD1Q9Y5Z9 338 aa10.73□□□□□ -0.69
VCL-204ENST00000472585 EP300Q09472 2414 aaPredicted RBP10.73□□□□□ -0.69
VCL-204ENST00000472585 PLXNA4Q9HCM2 1894 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 hCG_1642624A0A1W2PR95 340 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 PER2O15055 1255 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 MGEA5O60502 916 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 PPFIA3O75145 1194 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 IGBP1P78318 339 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 MRPS6P82932 125 aaKnown RBP10.72□□□□□ -0.69
VCL-204ENST00000472585 PAN2Q504Q3 1202 aaKnown RBP10.72□□□□□ -0.69
VCL-204ENST00000472585 TSHZ1Q6ZSZ6 1077 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 RSPH3Q86UC2 560 aa10.72□□□□□ -0.69
VCL-204ENST00000472585 MB21D2Q8IYB1 491 aaPredicted RBP10.72□□□□□ -0.69
VCL-204ENST00000472585 UBALD2Q8IYN6 164 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms