RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 REREQ9P2R6 1566 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 PPLO60437 1756 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 ERICH4A6NGS2 130 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 TDP2O95551 362 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 IVLP07476 585 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 PPP4CP60510 307 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 PPFIA1Q13136 1202 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 TAOK1Q7L7X3 1001 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 UBE2TQ9NPD8 197 aaPredicted RBP13.32□□□□□ -0.28
IRF1-208ENST00000472045 MYO1FO00160 1098 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 GIPC1O14908 333 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 CD2BP2O95400 341 aaKnown RBP13.32□□□□□ -0.28
IRF1-208ENST00000472045 NR3C2P08235 984 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 SFR1Q86XK3 245 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 RGL2O15211 777 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 TSPY1Q01534 308 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 RYBPQ8N488 228 aaPredicted RBP13.32□□□□□ -0.28
IRF1-208ENST00000472045 ANKRD13CQ8N6S4 541 aa13.32□□□□□ -0.28
IRF1-208ENST00000472045 CPSF3Q9UKF6 684 aaKnown RBP13.32□□□□□ -0.28
IRF1-208ENST00000472045 HUS1O60921 280 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 CAP2P40123 477 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 RGS2P41220 211 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 MXRA7P84157 204 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 ZBTB16Q05516 673 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 C6orf163Q5TEZ5 329 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 RINT1Q6NUQ1 792 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 SRBD1Q8N5C6 995 aaKnown RBP13.31□□□□□ -0.28
IRF1-208ENST00000472045 RAD54LQ92698 747 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 A0A087WWV3 80 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 STK25O00506 426 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 SLC12A2P55011 1212 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 LRRC63Q05C16 580 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 EPHA7Q15375 998 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 OR6B2Q6IFH4 312 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 UNC13DQ70J99 1090 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 MRPL4Q9BYD3 311 aaKnown RBP13.31□□□□□ -0.28
IRF1-208ENST00000472045 RWDD2AQ9UIY3 292 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 TFRCP02786 760 aaKnown RBP13.31□□□□□ -0.28
IRF1-208ENST00000472045 ATP5DP30049 168 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 NBPF9Q3BBW0 867 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 GPC2Q8N158 579 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 TRIM58Q8NG06 486 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 CHAMP1Q96JM3 812 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 PLCD4Q9BRC7 762 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 VPS33BQ9H267 617 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 SMARCAD1Q9H4L7 1026 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 INTS8Q75QN2 995 aaKnown RBP13.31□□□□□ -0.28
IRF1-208ENST00000472045 PXDNQ92626 1479 aa13.31□□□□□ -0.28
IRF1-208ENST00000472045 POTEFA5A3E0 1075 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 POTEGQ6S5H5 508 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 IFT20Q8IY31 132 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 SEPT1Q8WYJ6 367 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
IRF1-208ENST00000472045 TRIM7Q9C029 511 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 NKIRAS1Q9NYS0 192 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 PDHBP11177 359 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 GCLCP48506 637 aaPredicted RBP13.3□□□□□ -0.28
IRF1-208ENST00000472045 C4orf50Q6ZRC1 276 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 SCFD2Q8WU76 684 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 PIDD1Q9HB75 910 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 BUB1O43683 1085 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 GPC3P51654 580 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 DDR1Q08345 913 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 LGSNQ5TDP6 509 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 DNAJC24Q6P3W2 148 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 SRGAP1Q7Z6B7 1085 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 XXYLT1Q8NBI6 393 aa13.3□□□□□ -0.28
IRF1-208ENST00000472045 KCNK3O14649 394 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 CTSHP09668 335 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 RNF180Q86T96 592 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 PPP2R3CQ969Q6 453 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 SLC8A2Q9UPR5 921 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 KIF28PB7ZC32 967 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 DPYSL4O14531 572 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 EPB41L4AQ9HCS5 686 aaPredicted RBP13.29□□□□□ -0.28
IRF1-208ENST00000472045 EVCP57679 992 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 PTPROQ16827 1216 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 GNASQ5JWF2 1037 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 SCN4BQ8IWT1 228 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 GRK7Q8WTQ7 553 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 FAM213AQ9BRX8 229 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 THAP9Q9H5L6 903 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 KIF1AQ12756 1690 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 PFDN6O15212 129 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 ALDH1A1P00352 501 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 NFIAQ12857 509 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 PPP2R5CQ13362 524 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 DPCR1Q3MIW9 517 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 C1orf228Q6PIY5 440 aa13.29□□□□□ -0.28
IRF1-208ENST00000472045 H7C0C1 242 aa13.28□□□□□ -0.28
IRF1-208ENST00000472045 CIITAP33076 1130 aa13.28□□□□□ -0.28
IRF1-208ENST00000472045 ATP5OP48047 213 aa13.28□□□□□ -0.28
IRF1-208ENST00000472045 NBPF12Q5TAG4 269 aaPredicted RBP13.28□□□□□ -0.28
IRF1-208ENST00000472045 KAZNQ674X7 775 aa13.28□□□□□ -0.28
IRF1-208ENST00000472045 PLEKHH3Q7Z736 793 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms