RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SMARCAD1Q9H4L7 1026 aa21.9■■□□□ 1.1
SORT1-203ENST00000471996 M0QZ92 97 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 FSCN2O14926 492 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 ATP9AO75110 1047 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 TECP42680 631 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 GRM4Q14833 912 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 SPOUT1Q5T280 376 aaKnown RBP21.89■■□□□ 1.09
SORT1-203ENST00000471996 SYCE2Q6PIF2 218 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 RASGRP4Q8TDF6 673 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 TMX1Q9H3N1 280 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 NR2E1Q9Y466 385 aa21.89■■□□□ 1.09
SORT1-203ENST00000471996 DCHS1Q96JQ0 3298 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 INSRRP14616 1297 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 KCNA2P16389 499 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 SP100P23497 879 aaPredicted RBP21.88■■□□□ 1.09
SORT1-203ENST00000471996 SARSP49591 514 aaKnown RBP21.88■■□□□ 1.09
SORT1-203ENST00000471996 TMEM62Q0P6H9 643 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 MTMR3Q13615 1198 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 DSCC1Q9BVC3 393 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 TMEM260Q9NX78 707 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 SORCS3Q9UPU3 1222 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 PCDHB7Q9Y5E2 793 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 DOCK5Q9H7D0 1870 aa21.88■■□□□ 1.09
SORT1-203ENST00000471996 ID4P47928 161 aa21.87■■□□□ 1.09
SORT1-203ENST00000471996 CWC27Q6UX04 472 aaKnown RBP21.87■■□□□ 1.09
SORT1-203ENST00000471996 THNSL1Q8IYQ7 743 aa21.87■■□□□ 1.09
SORT1-203ENST00000471996 SMARCC2Q8TAQ2 1214 aa21.87■■□□□ 1.09
SORT1-203ENST00000471996 NKD2Q969F2 451 aaPredicted RBP21.87■■□□□ 1.09
SORT1-203ENST00000471996 GPRASP2Q96D09 838 aa21.87■■□□□ 1.09
SORT1-203ENST00000471996 CDHR1Q96JP9 859 aa21.87■■□□□ 1.09
SORT1-203ENST00000471996 APOL5Q9BWW9 433 aa21.87■■□□□ 1.09
SORT1-203ENST00000471996 CELF4Q9BZC1 486 aaKnown RBP21.87■■□□□ 1.09
SORT1-203ENST00000471996 LAMA4Q16363 1823 aa21.87■■□□□ 1.09
SORT1-203ENST00000471996 RIF1Q5UIP0 2472 aaKnown RBP21.86■■□□□ 1.09
SORT1-203ENST00000471996 KDM3AQ9Y4C1 1321 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 TBKBP1A7MCY6 615 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 BRD1O95696 1058 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 HOXB8P17481 243 aaPredicted RBP21.86■■□□□ 1.09
SORT1-203ENST00000471996 IBSPP21815 317 aaPredicted RBP21.86■■□□□ 1.09
SORT1-203ENST00000471996 USP17L6PQ6QN14 398 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 FAM43BQ6ZT52 329 aaPredicted RBP21.86■■□□□ 1.09
SORT1-203ENST00000471996 CYB5R4Q7L1T6 521 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 LZTS1Q9Y250 596 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 PCDHA2Q9Y5H9 948 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 PLXNA4Q9HCM2 1894 aa21.86■■□□□ 1.09
SORT1-203ENST00000471996 KAT6AQ92794 2004 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 PIK3CDO00329 1044 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 PLPP4Q5VZY2 271 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 ASTLQ6HA08 431 aaPredicted RBP21.85■■□□□ 1.09
SORT1-203ENST00000471996 LLGL2Q6P1M3 1020 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 FRMD5Q7Z6J6 570 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 COLGALT1Q8NBJ5 622 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 CUL5Q93034 780 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 TSHZ2Q9NRE2 1034 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 TYW1Q9NV66 732 aaKnown RBP21.85■■□□□ 1.09
SORT1-203ENST00000471996 RNF216Q9NWF9 866 aaPredicted RBP21.85■■□□□ 1.09
SORT1-203ENST00000471996 HCSTQ9UBK5 93 aa21.85■■□□□ 1.09
SORT1-203ENST00000471996 MEIS2O14770 477 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 MGEA5O60502 916 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 APOBRQ0VD83 1088 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 NFX1Q12986 1120 aaKnown RBP21.84■■□□□ 1.09
SORT1-203ENST00000471996 TMEM266Q2M3C6 531 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 FAM102BQ5T8I3 360 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 MCTP2Q6DN12 878 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 NME8Q8N427 588 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 TNPO1Q92973 898 aaKnown RBP21.84■■□□□ 1.09
SORT1-203ENST00000471996 PCYT2Q99447 389 aa21.84■■□□□ 1.09
SORT1-203ENST00000471996 FAM186AA6NE01 2351 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 C2CD4DB7Z1M9 353 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 ITGB5P18084 799 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 KRT76Q01546 638 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 PLCB3Q01970 1234 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 TROAPQ12815 778 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 ADSSL1Q8N142 457 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 PIBF1Q8WXW3 757 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 MRPS27Q92552 414 aaKnown RBP21.83■■□□□ 1.09
SORT1-203ENST00000471996 TCF25Q9BQ70 676 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 CWH43Q9H720 699 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 NGRNQ9NPE2 291 aaKnown RBP21.83■■□□□ 1.09
SORT1-203ENST00000471996 DIAPH3Q9NSV4 1193 aa21.83■■□□□ 1.09
SORT1-203ENST00000471996 PUF60Q9UHX1 559 aaKnown RBP21.83■■□□□ 1.09
SORT1-203ENST00000471996 SMIM35A0A1B0GVV1 85 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 HIDE1A8MVS5 230 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 LAG3P18627 525 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 TRAPPC12Q8WVT3 735 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 NECTIN4Q96NY8 510 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 ADAM2Q99965 735 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 SMOC2Q9H3U7 446 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 POMKQ9H5K3 350 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 ERVK-5Q9HDB9 667 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 ENTPD7Q9NQZ7 604 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 RGS18Q9NS28 235 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 C1orf112Q9NSG2 853 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 PKD2L1Q9P0L9 805 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 CDH22Q9UJ99 828 aa21.82■■□□□ 1.08
SORT1-203ENST00000471996 VPS13AQ96RL7 3174 aa21.81■■□□□ 1.08
SORT1-203ENST00000471996 CLCN5P51795 746 aa21.81■■□□□ 1.08
SORT1-203ENST00000471996 MTMR1Q13613 665 aa21.81■■□□□ 1.08
SORT1-203ENST00000471996 PLCB4Q15147 1175 aa21.81■■□□□ 1.08
SORT1-203ENST00000471996 TPRNQ4KMQ1 711 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms