RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 ATP6V0A1Q93050 837 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 NKX2-4Q9H2Z4 354 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 JPH1Q9HDC5 661 aaPredicted RBP10.75□□□□□ -0.69
GGPS1-204ENST00000471812 SLC9A2Q9UBY0 812 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 NOD1Q9Y239 953 aa10.75□□□□□ -0.69
GGPS1-204ENST00000471812 TRANK1O15050 2925 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 PRRC2BQ5JSZ5 2229 aaKnown RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 COL4A4P53420 1690 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 C17orf102A2RUQ5 167 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 LCHNA4D1U4 455 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 EPOPA6NHQ4 379 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 CD2BP2O95400 341 aaKnown RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 FOSP01100 380 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 SELPP16109 830 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 THPOP40225 353 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 NLRP5P59047 1200 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 IGBP1P78318 339 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 AKAP17AQ02040 695 aaKnown RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 RBL2Q08999 1139 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 PTK7Q13308 1070 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 UGCGQ16739 394 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 PRR16Q569H4 304 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 NSUN7Q8NE18 718 aaKnown RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 TBCKQ8TEA7 893 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 SEPT1Q8WYJ6 367 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 KHSRPQ92945 711 aaKnown RBP eCLIP10.74□□□□□ -0.692e-7■■□□□ 13.3
GGPS1-204ENST00000471812 GTF3C6Q969F1 213 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 CDX2Q99626 313 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 KATNAL1Q9BW62 490 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 SLKQ9H2G2 1235 aaPredicted RBP10.74□□□□□ -0.69
GGPS1-204ENST00000471812 C6orf50Q9HD87 102 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 MYO7AQ13402 2215 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 ATG2AQ2TAZ0 1938 aa10.74□□□□□ -0.69
GGPS1-204ENST00000471812 COL4A6Q14031 1691 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 ZBTB42B2RXF5 422 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 CPLX1O14810 134 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 MSH4O15457 936 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 SLC37A4O43826 429 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 ATG7O95352 703 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 DEXIO95424 95 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 CXCL10P02778 98 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 INSRRP14616 1297 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 ZNF76P36508 570 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 PPFIA1Q13136 1202 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 NR5A1Q13285 461 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 GRIK4Q16099 956 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 INF2Q27J81 1249 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 ABHD15Q6UXT9 468 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.73□□□□□ -0.69
GGPS1-204ENST00000471812 TRMT1LQ7Z2T5 733 aaKnown RBP10.73□□□□□ -0.69
GGPS1-204ENST00000471812 PARP9Q8IXQ6 854 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 BLIDQ8IZY5 108 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 PHF20Q9BVI0 1012 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 SEZ6LQ9BYH1 1024 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 FAM117AQ9C073 453 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 FTOQ9C0B1 505 aaKnown RBP eCLIP10.73□□□□□ -0.69
GGPS1-204ENST00000471812 PCDHA4Q9UN74 947 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 NFASCO94856 1347 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 BRWD1Q9NSI6 2320 aa10.73□□□□□ -0.69
GGPS1-204ENST00000471812 UNC80Q8N2C7 3258 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 IGKV6D-21A0A0A0MT36 114 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.72□□□□□ -0.69
GGPS1-204ENST00000471812 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.72□□□□□ -0.69
GGPS1-204ENST00000471812 TMEM150BA6NC51 233 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 RFXAPO00287 272 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 IPO5O00410 1097 aaKnown RBP10.72□□□□□ -0.69
GGPS1-204ENST00000471812 MAP3K7O43318 606 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 ZNF862O60290 1169 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 CHRNA1P02708 482 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 CIITAP33076 1130 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 WDR5P61964 334 aaKnown RBP10.72□□□□□ -0.69
GGPS1-204ENST00000471812 TMEM62Q0P6H9 643 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 BFSP2Q13515 415 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 ADGRE1Q14246 886 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 ZNF697Q5TEC3 545 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 GPR153Q6NV75 609 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 FAM117BQ6P1L5 589 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 USP38Q8NB14 1042 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 RETREG2Q8NC44 543 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 DAGLBQ8NCG7 672 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 DBF4BQ8NFT6 615 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 CAGE1Q8TC20 777 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 AFAP1L1Q8TED9 768 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 DNAJB3Q8WWF6 145 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 GLG1Q92896 1179 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 TNFRSF25Q93038 417 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 TIFAQ96CG3 184 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 FAM49AQ9H0Q0 323 aaPredicted RBP10.72□□□□□ -0.69
GGPS1-204ENST00000471812 EHMT1Q9H9B1 1298 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 CERS4Q9HA82 394 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 SH3GLB2Q9NR46 395 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 ORC3Q9UBD5 711 aaPredicted RBP10.72□□□□□ -0.69
GGPS1-204ENST00000471812 EMSYQ7Z589 1322 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 STK36Q9NRP7 1315 aa10.72□□□□□ -0.69
GGPS1-204ENST00000471812 CHMP2AO43633 222 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 ATP2A2P16615 1042 aaKnown RBP10.71□□□□□ -0.69
GGPS1-204ENST00000471812 GNA11P29992 359 aa10.71□□□□□ -0.69
GGPS1-204ENST00000471812 GUCY1B3Q02153 619 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms