RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 PASKQ96RG2 1323 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 RASSF10A6NK89 507 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 NOP56O00567 594 aaKnown RBP5.81□□□□□ -1.48
VPS13A-210ENST00000471439 ABLIM1O14639 778 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 U2SURPO15042 1029 aaKnown RBP5.81□□□□□ -1.48
VPS13A-210ENST00000471439 BUB1BO60566 1050 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-210ENST00000471439 CORO7P57737 925 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 DDB1Q16531 1140 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 SLC10A6Q3KNW5 377 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 SOGA3Q5TF21 947 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 COL23A1Q86Y22 540 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-210ENST00000471439 TEX2Q8IWB9 1127 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 DEPDC7Q96QD5 511 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 SRPK1Q96SB4 655 aaKnown RBP5.81□□□□□ -1.48
VPS13A-210ENST00000471439 ADAMTS20P59510 1910 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 BTAF1O14981 1849 aa5.81□□□□□ -1.48
VPS13A-210ENST00000471439 KIAA0232Q92628 1395 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 KIAA1551Q9HCM1 1747 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 PIK3C2AO00443 1686 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 ALS2Q96Q42 1657 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 KRTAP9-7A8MTY7 169 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 TRIM13O60858 407 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 FUCA1P04066 466 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 IGFBP6P24592 240 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-210ENST00000471439 FPR2P25090 351 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 ECI1P42126 302 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 NR1I3Q14994 352 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 OLFML2BQ68BL8 750 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 DENND5AQ6IQ26 1287 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 POMZP3Q6PJE2 187 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 NLRP10Q86W26 655 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 FAM129CQ86XR2 697 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 CRACR2BQ8N4Y2 399 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-210ENST00000471439 LZTR1Q8N653 840 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 DACT3Q96B18 629 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-210ENST00000471439 MARCH2Q9P0N8 246 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 LRP2BPQ9P2M1 347 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 SPATA31E1Q6ZUB1 1445 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 KANK1Q14678 1352 aa5.8□□□□□ -1.48
VPS13A-210ENST00000471439 NHSQ6T4R5 1651 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
VPS13A-210ENST00000471439 NTRK1P04629 796 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 SNRPB2P08579 225 aaKnown RBP5.79□□□□□ -1.48
VPS13A-210ENST00000471439 INHBBP09529 407 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 NAT2P11245 290 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 LCP1P13796 627 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 ATF2P15336 505 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 ZNF385BQ569K4 471 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 WWC2Q6AWC2 1192 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 CNKSR3Q6P9H4 555 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 SPATC1Q76KD6 591 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 JAZF1Q86VZ6 243 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 AMIGO3Q86WK7 504 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 ADGRG2Q8IZP9 1017 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 TMEM145Q8NBT3 493 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 KREMEN2Q8NCW0 462 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 PLEKHO2Q8TD55 490 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 SYT3Q9BQG1 590 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 KANSL2Q9H9L4 492 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 CYP26B1Q9NR63 512 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 DBR1Q9UK59 544 aaKnown RBP5.79□□□□□ -1.48
VPS13A-210ENST00000471439 COL18A1P39060 1754 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 TRPM3Q9HCF6 1732 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-210ENST00000471439 LAMA2P24043 3122 aaKnown RBP5.79□□□□□ -1.48
VPS13A-210ENST00000471439 QRICH2Q9H0J4 1663 aa5.79□□□□□ -1.48
VPS13A-210ENST00000471439 ARFGEF1Q9Y6D6 1849 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 IRS2Q9Y4H2 1338 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 GLTPD2A6NH11 291 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 RFXAPO00287 272 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 PDPK1O15530 556 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 NPHS1O60500 1241 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 DIAPH1O60610 1272 aaKnown RBP5.78□□□□□ -1.48
VPS13A-210ENST00000471439 ASGR2P07307 311 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 BMP7P18075 431 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 PMLP29590 882 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 BRCA1P38398 1863 aaKnown RBP5.78□□□□□ -1.48
VPS13A-210ENST00000471439 AFF3P51826 1226 aaKnown RBP5.78□□□□□ -1.48
VPS13A-210ENST00000471439 GFRA1P56159 465 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 TMEM62Q0P6H9 643 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 NAIPQ13075 1403 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 ALG3Q92685 438 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 MKL1Q969V6 931 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 C1orf159Q96HA4 380 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 MMP19Q99542 508 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 CCDC113Q9H0I3 377 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 PFDN2Q9UHV9 154 aa5.78□□□□□ -1.48
VPS13A-210ENST00000471439 LAMA3Q16787 3333 aa5.77□□□□□ -1.48
VPS13A-210ENST00000471439 CAPNS1P04632 268 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 KCNJ6P48051 423 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 RASGRF1Q13972 1273 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 TCERG1LQ5VWI1 586 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 SIAH1Q8IUQ4 282 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 SYT8Q8NBV8 401 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 USP33Q8TEY7 942 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 PWWP2AQ96N64 755 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 GPR101Q96P66 508 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-210ENST00000471439 DNAJC7Q99615 494 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 TRPM1Q7Z4N2 1603 aa5.77□□□□□ -1.49
VPS13A-210ENST00000471439 A0A1B0GTL3 188 aa5.76□□□□□ -1.49
VPS13A-210ENST00000471439 A0A1W2PQU0 124 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms