RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 TOP1MTQ969P6 601 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 TGS1Q96RS0 853 aaKnown RBP17.45■□□□□ 0.38
COL1A1-203ENST00000471344 ZNF577Q9BSK1 485 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 TM6SF1Q9BZW5 370 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 INSL6Q9Y581 213 aa17.45■□□□□ 0.38
COL1A1-203ENST00000471344 NLRC5Q86WI3 1866 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 ZBTB42B2RXF5 422 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 GNA11P29992 359 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 CD52P31358 61 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 SWSAP1Q6NVH7 229 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 RSPH3Q86UC2 560 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 CCDC148Q8NFR7 591 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 APBB2Q92870 758 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 ASB2Q96Q27 587 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 YME1L1Q96TA2 773 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 PDRG1Q9NUG6 133 aa17.44■□□□□ 0.38
COL1A1-203ENST00000471344 WDR81Q562E7 1941 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 NLRP5P59047 1200 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 SETQ01105 290 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-203ENST00000471344 SSRP1Q08945 709 aaKnown RBP17.43■□□□□ 0.38
COL1A1-203ENST00000471344 NPY5RQ15761 445 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 PDXDC2PQ6P474 469 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 MTHFD1LQ6UB35 978 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 TSHZ1Q6ZSZ6 1077 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 TRMT1LQ7Z2T5 733 aaKnown RBP17.43■□□□□ 0.38
COL1A1-203ENST00000471344 ATP8B4Q8TF62 1192 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 ATXN2LQ8WWM7 1075 aaKnown RBP17.43■□□□□ 0.38
COL1A1-203ENST00000471344 ZNF274Q96GC6 653 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-203ENST00000471344 ZNF302Q9NR11 478 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 PCDHA2Q9Y5H9 948 aa17.43■□□□□ 0.38
COL1A1-203ENST00000471344 CIITAP33076 1130 aa17.42■□□□□ 0.38
COL1A1-203ENST00000471344 KCNQ1P51787 676 aa17.42■□□□□ 0.38
COL1A1-203ENST00000471344 MRPS5P82675 430 aaKnown RBP17.42■□□□□ 0.38
COL1A1-203ENST00000471344 FAM160B1Q5W0V3 765 aa17.42■□□□□ 0.38
COL1A1-203ENST00000471344 MIS18BP1Q6P0N0 1132 aa17.42■□□□□ 0.38
COL1A1-203ENST00000471344 BICD2Q8TD16 824 aa17.42■□□□□ 0.38
COL1A1-203ENST00000471344 PPP1R16BQ96T49 567 aa17.42■□□□□ 0.38
COL1A1-203ENST00000471344 TRPV2Q9Y5S1 764 aa17.42■□□□□ 0.38
COL1A1-203ENST00000471344 TCF20Q9UGU0 1960 aaKnown RBP17.42■□□□□ 0.38
COL1A1-203ENST00000471344 ATG2AQ2TAZ0 1938 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 ENPP3O14638 875 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 CPLX1O14810 134 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 MSH4O15457 936 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 KLRC1P26715 233 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 SCRN1Q12765 414 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 MCTP2Q6DN12 878 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 ZNF746Q6NUN9 644 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-203ENST00000471344 TRIM22Q8IYM9 498 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 FBXO22Q8NEZ5 403 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 TBCKQ8TEA7 893 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 NECAB3Q96P71 396 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-203ENST00000471344 CDHR5Q9HBB8 845 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 SH3GLB2Q9NR46 395 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 GJB4Q9NTQ9 266 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 TBC1D22BQ9NU19 505 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 TPCN1Q9ULQ1 816 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 PCDHA4Q9UN74 947 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 EVPLQ92817 2033 aa17.41■□□□□ 0.38
COL1A1-203ENST00000471344 MYH9P35579 1960 aaKnown RBP17.4■□□□□ 0.38
COL1A1-203ENST00000471344 RALGAPA2Q2PPJ7 1873 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 SMIM35A0A1B0GVV1 85 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 M0R2N6 131 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 HBP1O60381 514 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 DEXIO95424 95 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 TDP2O95551 362 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 LINC00271P0C7V0 271 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 SLC26A2P50443 739 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 UGCGQ16739 394 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 EPC2Q52LR7 807 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 IER5Q5VY09 327 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 RTN4RL1Q86UN2 441 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-203ENST00000471344 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 ADAMTS19Q8TE59 1207 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 SYMPKQ92797 1274 aaKnown RBP17.4■□□□□ 0.38
COL1A1-203ENST00000471344 RC3H2Q9HBD1 1191 aaKnown RBP17.4■□□□□ 0.38
COL1A1-203ENST00000471344 GABBR1Q9UBS5 961 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 PADI3Q9ULW8 664 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 KCNJ14Q9UNX9 436 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 GINS2Q9Y248 185 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 MAFBQ9Y5Q3 323 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-203ENST00000471344 IGSF9BQ9UPX0 1349 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 KIAA1671Q9BY89 1806 aa17.4■□□□□ 0.38
COL1A1-203ENST00000471344 TTC3P53804 2025 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 CHMP2AO43633 222 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 ZNF862O60290 1169 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 C22orf31O95567 290 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 KRT76Q01546 638 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 ERICH6BQ5W0A0 696 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 KIAA0319LQ8IZA0 1049 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 BLIDQ8IZY5 108 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 TMEM40Q8WWA1 233 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 CELF4Q9BZC1 486 aaKnown RBP17.39■□□□□ 0.37
COL1A1-203ENST00000471344 TMX1Q9H3N1 280 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 UNC45AQ9H3U1 944 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 BDP1A6H8Y1 2624 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 COL1A2P08123 1366 aa17.39■□□□□ 0.37
COL1A1-203ENST00000471344 BRWD1Q9NSI6 2320 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 M0QZ92 97 aa17.38■□□□□ 0.37
COL1A1-203ENST00000471344 LARGE1O95461 756 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms