RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MRPS6P82932 125 aaKnown RBP10.35□□□□□ -0.75
SF3A1-206ENST00000471037 MTMR1Q13613 665 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-206ENST00000471037 EP400NLQ6ZTU2 488 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 DNAJB3Q8WWF6 145 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 LINC01599Q8WXQ3 324 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 BRF1Q92994 677 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 POP1Q99575 1024 aaKnown RBP10.35□□□□□ -0.75
SF3A1-206ENST00000471037 MYL10Q9BUA6 226 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 LRRC2Q9BYS8 371 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 SMARCAD1Q9H4L7 1026 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 SH2B1Q9NRF2 756 aaPredicted RBP10.35□□□□□ -0.75
SF3A1-206ENST00000471037 CDY2AQ9Y6F7 541 aa10.35□□□□□ -0.75
SF3A1-206ENST00000471037 TTC3P53804 2025 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 TBX10O75333 385 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 PLEKHA8P1O95397 391 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 MARK3P27448 753 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 RCAN1P53805 252 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 DLX2Q07687 328 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-206ENST00000471037 SMAD4Q13485 552 aaKnown RBP10.34□□□□□ -0.75
SF3A1-206ENST00000471037 CAMK1Q14012 370 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 NAALADL2Q58DX5 795 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 CMTR2Q8IYT2 770 aaKnown RBP10.34□□□□□ -0.75
SF3A1-206ENST00000471037 SRBD1Q8N5C6 995 aaKnown RBP10.34□□□□□ -0.75
SF3A1-206ENST00000471037 GLG1Q92896 1179 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 ZNF274Q96GC6 653 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-206ENST00000471037 FTHL17Q9BXU8 183 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 PSTPIP2Q9H939 334 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 AGO3Q9H9G7 860 aaKnown RBP10.34□□□□□ -0.75
SF3A1-206ENST00000471037 JADE2Q9NQC1 790 aa10.34□□□□□ -0.75
SF3A1-206ENST00000471037 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
SF3A1-206ENST00000471037 CCDC69A6NI79 296 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 SPDYE3A6NKU9 549 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 CALM1P0DP23 149 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 CALM2P0DP24 149 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 CALM3P0DP25 149 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 INSRRP14616 1297 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 CD52P31358 61 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 APOBRQ0VD83 1088 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 ADAM15Q13444 863 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 HERC4Q5GLZ8 1057 aaPredicted RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 IER5Q5VY09 327 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 SYNE3Q6ZMZ3 975 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 NFXL1Q6ZNB6 911 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 RTN4RL1Q86UN2 441 aaPredicted RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 ALYREFQ86V81 257 aaKnown RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 NPAS4Q8IUM7 802 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 TEX2Q8IWB9 1127 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 TNPO1Q92973 898 aaKnown RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 PPP2R3CQ969Q6 453 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 TMX3Q96JJ7 454 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 MSLNLQ96KJ4 702 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 IPO9Q96P70 1041 aaKnown RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 UIMC1Q96RL1 719 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 PCYT2Q99447 389 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 JPH1Q9HDC5 661 aaPredicted RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 ALG13Q9NP73 1137 aaKnown RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 CD207Q9UJ71 328 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 TPCN1Q9ULQ1 816 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 PLAGL2Q9UPG8 496 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 SLC12A7Q9Y666 1083 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 MRPL42Q9Y6G3 142 aaKnown RBP10.33□□□□□ -0.76
SF3A1-206ENST00000471037 KAT6AQ92794 2004 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 IGSF9BQ9UPX0 1349 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 KDM3AQ9Y4C1 1321 aa10.33□□□□□ -0.76
SF3A1-206ENST00000471037 NID2Q14112 1375 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 KLF18A0A0U1RQI7 1052 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 LINC01565O15544 149 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 EYA4O95677 639 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 ITGB1P05556 798 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 STAG3L1P0CL83 205 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 GTF2F1P35269 517 aaKnown RBP eCLIP10.32□□□□□ -0.76
SF3A1-206ENST00000471037 IGBP1P78318 339 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 NHLH1Q02575 133 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 CLUL1Q15846 466 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 UBE2SQ16763 222 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 APOA5Q6Q788 366 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 HFE2Q6ZVN8 426 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 PLPPR4Q7Z2D5 763 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 CMTR1Q8N1G2 835 aaKnown RBP10.32□□□□□ -0.76
SF3A1-206ENST00000471037 SPPL3Q8TCT6 385 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 FBXL18Q96ME1 805 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 FAM49AQ9H0Q0 323 aaPredicted RBP10.32□□□□□ -0.76
SF3A1-206ENST00000471037 SLKQ9H2G2 1235 aaPredicted RBP10.32□□□□□ -0.76
SF3A1-206ENST00000471037 AZI2Q9H6S1 392 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 KCNH7Q9NS40 1196 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 PKD2L1Q9P0L9 805 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 SLC9A2Q9UBY0 812 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 PADI3Q9ULW8 664 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 PCDHA6Q9UN73 950 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 PCDHA8Q9Y5H6 950 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 PCDHA2Q9Y5H9 948 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 TRPV2Q9Y5S1 764 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 NFASCO94856 1347 aa10.32□□□□□ -0.76
SF3A1-206ENST00000471037 MYO7AQ13402 2215 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 KIAA1671Q9BY89 1806 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 SMIM35A0A1B0GVV1 85 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 GOLGA8BA8MQT2 603 aa10.31□□□□□ -0.76
SF3A1-206ENST00000471037 M0QZ92 97 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms