RNA–Protein interactions for RNA: ENST00000469694.5

GPC1-208, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 2,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-208ENST00000469694 MACROD2A1Z1Q3 448 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 ZNF233A6NK53 670 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 SRRM3A6NNA2 597 aaPredicted RBP15.23■□□□□ 0.03
GPC1-208ENST00000469694 MDH1P40925 334 aaKnown RBP15.23■□□□□ 0.03
GPC1-208ENST00000469694 APBA1Q02410 837 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 TEPSINQ96N21 525 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 ANO3Q9BYT9 981 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 ACTR5Q9H9F9 607 aaPredicted RBP15.23■□□□□ 0.03
GPC1-208ENST00000469694 RTN2O75298 545 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 NR1D1P20393 614 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 FER1L6Q2WGJ9 1857 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 FKBP1CQ5VVH2 108 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 HAUS3Q68CZ6 603 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 CYB5D1Q6P9G0 228 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 FMNL3Q8IVF7 1028 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 FUKQ8N0W3 1084 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 NELFBQ8WX92 580 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 HPS3Q969F9 1004 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 CCDC114Q96M63 670 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 HACL1Q9UJ83 578 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 CD2APQ9Y5K6 639 aa15.23■□□□□ 0.03
GPC1-208ENST00000469694 MATR3P43243 847 aaKnown RBP eCLIP15.22■□□□□ 0.03
GPC1-208ENST00000469694 SLC30A10Q6XR72 485 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 IRF2BP1Q8IU81 584 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 EGFL6Q8IUX8 553 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 CCDC170Q8IYT3 715 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 ZNF507Q8TCN5 953 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 ZNF341Q9BYN7 854 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 NHEJ1Q9H9Q4 299 aaPredicted RBP15.22■□□□□ 0.03
GPC1-208ENST00000469694 GOLGA6L7A0A1B0GV03 622 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 KIF3CO14782 793 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 MARCH6O60337 910 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 IPO7O95373 1038 aaKnown RBP15.22■□□□□ 0.03
GPC1-208ENST00000469694 IBSPP21815 317 aaPredicted RBP15.22■□□□□ 0.03
GPC1-208ENST00000469694 KIF5AQ12840 1032 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 CFAP58Q5T655 872 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 TLDC1Q6P9B6 456 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 KBTBD4Q9NVX7 518 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 LGALS16A8MUM7 142 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 PHF20L1A8MW92 1017 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 ZNF280AP59817 542 aaPredicted RBP15.22■□□□□ 0.03
GPC1-208ENST00000469694 ECM1Q16610 540 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 KCNK18Q7Z418 384 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 CD302Q8IX05 232 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 TRIM58Q8NG06 486 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 CYP2W1Q8TAV3 490 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 CCDC43Q96MW1 224 aaKnown RBP15.22■□□□□ 0.03
GPC1-208ENST00000469694 GOPCQ9HD26 462 aa15.22■□□□□ 0.03
GPC1-208ENST00000469694 BRCA1P38398 1863 aaKnown RBP15.21■□□□□ 0.03
GPC1-208ENST00000469694 A0A1B0GUA9 196 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 H7C1D1 291 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 EZRP15311 586 aaKnown RBP15.21■□□□□ 0.03
GPC1-208ENST00000469694 STAT3P40763 770 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 PRCPP42785 496 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 VAV2P52735 878 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 PMS1P54277 932 aaKnown RBP15.21■□□□□ 0.03
GPC1-208ENST00000469694 UBXN2AP68543 259 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 GRB10Q13322 594 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 NBPF12Q5TAG4 269 aaPredicted RBP15.21■□□□□ 0.03
GPC1-208ENST00000469694 CCDC121Q6ZUS5 278 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 GPIHBP1Q8IV16 184 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 C1orf131Q8NDD1 294 aaKnown RBP15.21■□□□□ 0.03
GPC1-208ENST00000469694 UPF1Q92900 1129 aaKnown RBP eCLIP15.21■□□□□ 0.03
GPC1-208ENST00000469694 SGSM3Q96HU1 749 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 AK8Q96MA6 479 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 TRIM6Q9C030 488 aaPredicted RBP15.21■□□□□ 0.03
GPC1-208ENST00000469694 DEFB129Q9H1M3 183 aa15.21■□□□□ 0.03
GPC1-208ENST00000469694 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.21■□□□□ 0.03
GPC1-208ENST00000469694 ECM2O94769 699 aaPredicted RBP15.21■□□□□ 0.02
GPC1-208ENST00000469694 CFBP00751 764 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 CYP27A1Q02318 531 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 C11orf91Q3C1V1 193 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 PRR16Q569H4 304 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 PPP4R3AQ6IN85 833 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 BTNL9Q6UXG8 535 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 PNMA5Q96PV4 448 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 AGPAT5Q9NUQ2 364 aa15.21■□□□□ 0.02
GPC1-208ENST00000469694 TPX2Q9ULW0 747 aaKnown RBP15.21■□□□□ 0.02
GPC1-208ENST00000469694 MYH7BA7E2Y1 1941 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 E7EVH7 732 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 FZD9O00144 591 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 KLRC4O43908 158 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 TBC1D12O60347 775 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 CLSTN1O94985 981 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 CALRP27797 417 aaKnown RBP15.2■□□□□ 0.02
GPC1-208ENST00000469694 CLNS1AP54105 237 aaKnown RBP15.2■□□□□ 0.02
GPC1-208ENST00000469694 ARHGAP4P98171 946 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 DLK2Q6UY11 383 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 SNX29Q8TEQ0 813 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 PIK3R5Q8WYR1 880 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 CYFIP2Q96F07 1278 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 OSBPL9Q96SU4 736 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 PYM1Q9BRP8 204 aaKnown RBP15.2■□□□□ 0.02
GPC1-208ENST00000469694 TSGA10Q9BZW7 698 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 FKBP15Q5T1M5 1219 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 ZNF658Q5TYW1 1059 aaPredicted RBP15.2■□□□□ 0.02
GPC1-208ENST00000469694 ATP6V1G3Q96LB4 118 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 OSBPL7Q9BZF2 842 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 ATP6V0A4Q9HBG4 840 aa15.2■□□□□ 0.02
GPC1-208ENST00000469694 BLOC1S4Q9NUP1 217 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms