RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 COL6A1P12109 1028 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 TUSC3Q13454 348 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 SMAD2Q15796 467 aaKnown RBP4.63□□□□□ -1.67
TPR-204ENST00000469463 SPDYAQ5MJ70 313 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 TMC5Q6UXY8 1006 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 PTRH1Q86Y79 214 aaKnown RBP4.63□□□□□ -1.67
TPR-204ENST00000469463 REXO1L1PQ8IX06 675 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 DTX3Q8N9I9 347 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 Q8TCH9 128 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 WWC2-AS2Q96NR7 200 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 RIC8BQ9NVN3 520 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 SLC4A7Q9Y6M7 1214 aa4.63□□□□□ -1.67
TPR-204ENST00000469463 PRAMEF25A6NGN4 478 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 ARVCFO00192 962 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 KLHL18O94889 574 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 PDE6AP16499 860 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 IGFALSP35858 605 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 PURAQ00577 322 aaKnown RBP4.62□□□□□ -1.67
TPR-204ENST00000469463 PABPC4Q13310 644 aaKnown RBP eCLIP4.62□□□□□ -1.67
TPR-204ENST00000469463 PRKD1Q15139 912 aaPredicted RBP4.62□□□□□ -1.67
TPR-204ENST00000469463 TAF7LQ5H9L4 462 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 ARHGAP36Q6ZRI8 547 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 Q6ZUG5 572 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 KCTD1Q719H9 257 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.62□□□□□ -1.67
TPR-204ENST00000469463 NOP9Q86U38 636 aaKnown RBP4.62□□□□□ -1.67
TPR-204ENST00000469463 JMYQ8N9B5 988 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 PCDH19Q8TAB3 1148 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 UHMK1Q8TAS1 419 aaKnown RBP4.62□□□□□ -1.67
TPR-204ENST00000469463 AJUBAQ96IF1 538 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 CDIP1Q9H305 208 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 CBLCQ9ULV8 474 aa4.62□□□□□ -1.67
TPR-204ENST00000469463 FBXO21O94952 628 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 CNOT4O95628 575 aaKnown RBP4.61□□□□□ -1.67
TPR-204ENST00000469463 FLT3P36888 993 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 ZNF460Q14592 562 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 GPR19Q15760 415 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 ZNF568Q3ZCX4 644 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 FNDC3BQ53EP0 1204 aaKnown RBP4.61□□□□□ -1.67
TPR-204ENST00000469463 TRIM61Q5EBN2 209 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 CRB2Q5IJ48 1285 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 PIK3R6Q5UE93 754 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 CNNM4Q6P4Q7 775 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 C16orf86Q6ZW13 317 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 DDX53Q86TM3 631 aaKnown RBP4.61□□□□□ -1.67
TPR-204ENST00000469463 OSTM1Q86WC4 334 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 PROSER1Q86XN7 944 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 IGSF22Q8N9C0 903 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 GSTCDQ8NEC7 633 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 SCLYQ96I15 445 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 PTPN18Q99952 460 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 PDGFDQ9GZP0 370 aaPredicted RBP4.61□□□□□ -1.67
TPR-204ENST00000469463 TNPO3Q9Y5L0 923 aaKnown RBP4.61□□□□□ -1.67
TPR-204ENST00000469463 HS3ST3A1Q9Y663 406 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 ATP23Q9Y6H3 246 aa4.61□□□□□ -1.67
TPR-204ENST00000469463 TCRBV16S1A1N1A0A5B0 115 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 M0R2C6 588 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 SCDO00767 359 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 HIP1RO75146 1068 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 KNG1P01042 644 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 JMJD7P0C870 316 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 NEK4P51957 841 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 JAM2P57087 298 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 TKFCQ3LXA3 575 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 PAN2Q504Q3 1202 aaKnown RBP4.6□□□□□ -1.67
TPR-204ENST00000469463 FIGNQ5HY92 759 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 BTBD8Q5XKL5 378 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 DHX37Q8IY37 1157 aaKnown RBP4.6□□□□□ -1.67
TPR-204ENST00000469463 NLGN4XQ8N0W4 816 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 C2orf69Q8N8R5 385 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 NUDT10Q8NFP7 164 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 NUDT11Q96G61 164 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 CLUHP3Q96NS8 147 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 LMF1Q96S06 567 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 ZNF341Q9BYN7 854 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 SLKQ9H2G2 1235 aaPredicted RBP4.6□□□□□ -1.67
TPR-204ENST00000469463 TRIM39Q9HCM9 518 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 SAMD15Q9P1V8 674 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 ARHGAP28Q9P2N2 729 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 RBPJLQ9UBG7 517 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 SRPK3Q9UPE1 567 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 WASF3Q9UPY6 502 aa4.6□□□□□ -1.67
TPR-204ENST00000469463 B4E1Z4 1266 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 KPNA6O60684 536 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 DNAJC8O75937 253 aaPredicted RBP4.59□□□□□ -1.67
TPR-204ENST00000469463 ASLP04424 464 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 FAHP16930 419 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 TGFB2P61812 414 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 KLF10Q13118 480 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 TMEM177Q53S58 311 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 MIIPQ5JXC2 388 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 PHF19Q5T6S3 580 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 GIMAP6Q6P9H5 292 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 UBE2R2Q712K3 238 aaPredicted RBP4.59□□□□□ -1.67
TPR-204ENST00000469463 C16orf59Q7L2K0 433 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 NIM1KQ8IY84 436 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 SYNPOQ8N3V7 929 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 GIMAP8Q8ND71 665 aaPredicted RBP4.59□□□□□ -1.67
TPR-204ENST00000469463 CLEC4DQ8WXI8 215 aa4.59□□□□□ -1.67
TPR-204ENST00000469463 EDAQ92838 391 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms