RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 TOB2Q14106 344 aaPredicted RBP24.74■■□□□ 1.55
TTC28-204ENST00000468807 PRR16Q569H4 304 aa24.74■■□□□ 1.55
TTC28-204ENST00000468807 FBXO47Q5MNV8 452 aa24.74■■□□□ 1.55
TTC28-204ENST00000468807 MIS18BP1Q6P0N0 1132 aa24.74■■□□□ 1.55
TTC28-204ENST00000468807 ZNF302Q9NR11 478 aa24.74■■□□□ 1.55
TTC28-204ENST00000468807 TCF20Q9UGU0 1960 aaKnown RBP24.74■■□□□ 1.55
TTC28-204ENST00000468807 EPB41L2O43491 1005 aaKnown RBP24.73■■□□□ 1.55
TTC28-204ENST00000468807 ATG7O95352 703 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 RPLP2P05387 115 aaKnown RBP24.73■■□□□ 1.55
TTC28-204ENST00000468807 SLC26A2P50443 739 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 AAK1Q2M2I8 961 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 PDXDC2PQ6P474 469 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 ABHD15Q6UXT9 468 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 TSHZ1Q6ZSZ6 1077 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 CCDC60Q8IWA6 550 aaPredicted RBP24.73■■□□□ 1.55
TTC28-204ENST00000468807 CKAP2LQ8IYA6 745 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 TRIM22Q8IYM9 498 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 SP7Q8TDD2 431 aaPredicted RBP24.73■■□□□ 1.55
TTC28-204ENST00000468807 PCDHA2Q9Y5H9 948 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 TRPV2Q9Y5S1 764 aa24.73■■□□□ 1.55
TTC28-204ENST00000468807 CPLX1O14810 134 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 CD52P31358 61 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 EVCP57679 992 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 NLRP5P59047 1200 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 SSRP1Q08945 709 aaKnown RBP24.72■■□□□ 1.55
TTC28-204ENST00000468807 STK3Q13188 491 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 SWSAP1Q6NVH7 229 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 TRMT1LQ7Z2T5 733 aaKnown RBP24.72■■□□□ 1.55
TTC28-204ENST00000468807 CRYGNQ8WXF5 182 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 LMCD1Q9NZU5 365 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 LOXHD1Q8IVV2 1947 aa24.72■■□□□ 1.55
TTC28-204ENST00000468807 IGKV6D-21A0A0A0MT36 114 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 TNFRSF10AO00220 468 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 DHX15O43143 795 aaKnown RBP24.71■■□□□ 1.55
TTC28-204ENST00000468807 MTHFD1LQ6UB35 978 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 ATP8B4Q8TF62 1192 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 IL17RAQ96F46 866 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 UHRF1Q96T88 793 aaPredicted RBP24.71■■□□□ 1.55
TTC28-204ENST00000468807 TBC1D22BQ9NU19 505 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 COG5Q9UP83 839 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 GINS2Q9Y248 185 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 SAMM50Q9Y512 469 aa24.71■■□□□ 1.55
TTC28-204ENST00000468807 MYH9P35579 1960 aaKnown RBP24.71■■□□□ 1.55
TTC28-204ENST00000468807 NLRC5Q86WI3 1866 aa24.7■■□□□ 1.55
TTC28-204ENST00000468807 HBP1O60381 514 aa24.7■■□□□ 1.54
TTC28-204ENST00000468807 KLRC1P26715 233 aa24.7■■□□□ 1.54
TTC28-204ENST00000468807 KCNQ1P51787 676 aa24.7■■□□□ 1.54
TTC28-204ENST00000468807 EPC2Q52LR7 807 aa24.7■■□□□ 1.54
TTC28-204ENST00000468807 HLA-CQ95604 372 aa24.7■■□□□ 1.54
TTC28-204ENST00000468807 AGO3Q9H9G7 860 aaKnown RBP24.7■■□□□ 1.54
TTC28-204ENST00000468807 SMIM35A0A1B0GVV1 85 aa24.69■■□□□ 1.54
TTC28-204ENST00000468807 ENPP3O14638 875 aa24.69■■□□□ 1.54
TTC28-204ENST00000468807 ZNF746Q6NUN9 644 aaPredicted RBP24.69■■□□□ 1.54
TTC28-204ENST00000468807 SAMD11Q96NU1 681 aa24.69■■□□□ 1.54
TTC28-204ENST00000468807 CELF4Q9BZC1 486 aaKnown RBP24.69■■□□□ 1.54
TTC28-204ENST00000468807 TM6SF1Q9BZW5 370 aa24.69■■□□□ 1.54
TTC28-204ENST00000468807 SH3GLB2Q9NR46 395 aa24.69■■□□□ 1.54
TTC28-204ENST00000468807 PDRG1Q9NUG6 133 aa24.69■■□□□ 1.54
TTC28-204ENST00000468807 PSAPP07602 524 aa24.68■■□□□ 1.54
TTC28-204ENST00000468807 IBSPP21815 317 aaPredicted RBP24.68■■□□□ 1.54
TTC28-204ENST00000468807 KRT76Q01546 638 aa24.68■■□□□ 1.54
TTC28-204ENST00000468807 PAK2Q13177 524 aa24.68■■□□□ 1.54
TTC28-204ENST00000468807 CPLX2Q6PUV4 134 aaKnown RBP24.68■■□□□ 1.54
TTC28-204ENST00000468807 TMEM192Q8IY95 271 aa24.68■■□□□ 1.54
TTC28-204ENST00000468807 FIBCD1Q8N539 461 aa24.68■■□□□ 1.54
TTC28-204ENST00000468807 ZNF274Q96GC6 653 aaPredicted RBP24.68■■□□□ 1.54
TTC28-204ENST00000468807 EVPLQ92817 2033 aa24.68■■□□□ 1.54
TTC28-204ENST00000468807 NCOR1O75376 2440 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 CIITAP33076 1130 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 GPM6BQ13491 265 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 PTPROQ16827 1216 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 ZNF484Q5JVG2 852 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 SMAP1Q8IYB5 467 aaPredicted RBP24.67■■□□□ 1.54
TTC28-204ENST00000468807 NME8Q8N427 588 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 NECAB3Q96P71 396 aaPredicted RBP24.67■■□□□ 1.54
TTC28-204ENST00000468807 GABBR1Q9UBS5 961 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 PADI3Q9ULW8 664 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 PCDHA10Q9Y5I2 948 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 COL1A2P08123 1366 aa24.67■■□□□ 1.54
TTC28-204ENST00000468807 BDP1A6H8Y1 2624 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 ADGRA3Q8IWK6 1321 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 DEXIO95424 95 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 BMP1P13497 986 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 ATP4AP20648 1035 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 CTNNB1P35222 781 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 PPP1R16BQ96T49 567 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 FTHL17Q9BXU8 183 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 PPP4R2Q9NY27 417 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 RALGAPA2Q2PPJ7 1873 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 BRWD1Q9NSI6 2320 aa24.66■■□□□ 1.54
TTC28-204ENST00000468807 IGSF9BQ9UPX0 1349 aa24.65■■□□□ 1.54
TTC28-204ENST00000468807 CHMP2AO43633 222 aa24.65■■□□□ 1.54
TTC28-204ENST00000468807 TTC3P53804 2025 aa24.65■■□□□ 1.54
TTC28-204ENST00000468807 NFX1Q12986 1120 aaKnown RBP24.65■■□□□ 1.54
TTC28-204ENST00000468807 TMEM266Q2M3C6 531 aa24.65■■□□□ 1.54
TTC28-204ENST00000468807 METTL13Q8N6R0 699 aa24.65■■□□□ 1.54
TTC28-204ENST00000468807 TBCKQ8TEA7 893 aa24.65■■□□□ 1.54
TTC28-204ENST00000468807 LINC01599Q8WXQ3 324 aa24.65■■□□□ 1.54
TTC28-204ENST00000468807 BBXQ8WY36 941 aaPredicted RBP24.65■■□□□ 1.54
TTC28-204ENST00000468807 LENG9Q96B70 501 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms