RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 PTPN2P17706 415 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 DRD4P21917 467 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 KCNA3P22001 575 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 IL4RP24394 825 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 PTPN12Q05209 780 aaKnown RBP10.01□□□□□ -0.81
LCA5-203ENST00000467898 RESTQ13127 1097 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 ITGA9Q13797 1035 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 SEPT6Q14141 434 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 PCNX4Q63HM2 1172 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 TRPM8Q7Z2W7 1104 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.01□□□□□ -0.81
LCA5-203ENST00000467898 HAUS7Q99871 368 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 CNOT10Q9H9A5 744 aaKnown RBP10.01□□□□□ -0.81
LCA5-203ENST00000467898 ECHDC1Q9NTX5 307 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 FKBP14Q9NWM8 211 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 ARHGEF38Q9NXL2 777 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 TLR7Q9NYK1 1049 aaKnown RBP10.01□□□□□ -0.81
LCA5-203ENST00000467898 AKR1B15C9JRZ8 316 aaPredicted RBP10.01□□□□□ -0.81
LCA5-203ENST00000467898 TNFRSF10AO00220 468 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 CYP2C9P11712 490 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 CCNCP24863 283 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 NCALDP61601 193 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 FOXO4P98177 505 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 LRP8Q14114 963 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 KIF22Q14807 665 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 SYCP2LQ5T4T6 812 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 AGAP9Q5VTM2 703 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 IL23RQ5VWK5 629 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 TMC4Q7Z404 712 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 FERMT3Q86UX7 667 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 GRAMD2AQ8IUY3 354 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 FMR1NBQ8N0W7 255 aaPredicted RBP10.01□□□□□ -0.81
LCA5-203ENST00000467898 CNTROBQ8N137 903 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 GIPC2Q8TF65 315 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 GATA6Q92908 595 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 LSG1Q9H089 658 aaKnown RBP10.01□□□□□ -0.81
LCA5-203ENST00000467898 ANKRD36CQ5JPF3 1778 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 ITIH6Q6UXX5 1313 aa10.01□□□□□ -0.81
LCA5-203ENST00000467898 ANO9A1A5B4 782 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ATP2C2O75185 946 aa10□□□□□ -0.81
LCA5-203ENST00000467898 LARGE1O95461 756 aa10□□□□□ -0.81
LCA5-203ENST00000467898 GNAT2P19087 354 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ERCC5P28715 1186 aaPredicted RBP10□□□□□ -0.81
LCA5-203ENST00000467898 KCNA1Q09470 495 aa10□□□□□ -0.81
LCA5-203ENST00000467898 WTAPQ15007 396 aa10□□□□□ -0.81
LCA5-203ENST00000467898 DDB1Q16531 1140 aa10□□□□□ -0.81
LCA5-203ENST00000467898 LIN52Q52LA3 116 aa10□□□□□ -0.81
LCA5-203ENST00000467898 AACSQ86V21 672 aa10□□□□□ -0.81
LCA5-203ENST00000467898 CROCCP3Q8IVE0 287 aa10□□□□□ -0.81
LCA5-203ENST00000467898 NOC3LQ8WTT2 800 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 PIGBQ92521 554 aa10□□□□□ -0.81
LCA5-203ENST00000467898 CHMP6Q96FZ7 201 aa10□□□□□ -0.81
LCA5-203ENST00000467898 SDF4Q9BRK5 362 aa10□□□□□ -0.81
LCA5-203ENST00000467898 GIT1Q9Y2X7 761 aa10□□□□□ -0.81
LCA5-203ENST00000467898 NUMBLQ9Y6R0 609 aa10□□□□□ -0.81
LCA5-203ENST00000467898 CFAP69A5D8W1 941 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ZNF233A6NK53 670 aa10□□□□□ -0.81
LCA5-203ENST00000467898 UBL4AP11441 157 aa10□□□□□ -0.81
LCA5-203ENST00000467898 RGS2P41220 211 aa10□□□□□ -0.81
LCA5-203ENST00000467898 TUBA3CQ13748 450 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ANKRD1Q15327 319 aa10□□□□□ -0.81
LCA5-203ENST00000467898 TMCO5AQ8N6Q1 288 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ZNF713Q8N859 430 aaPredicted RBP10□□□□□ -0.81
LCA5-203ENST00000467898 TSEN2Q8NCE0 465 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 FNDC8Q8TC99 324 aa10□□□□□ -0.81
LCA5-203ENST00000467898 MRPS27Q92552 414 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 MMS19Q96T76 1030 aa10□□□□□ -0.81
LCA5-203ENST00000467898 CYP39A1Q9NYL5 469 aa10□□□□□ -0.81
LCA5-203ENST00000467898 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
LCA5-203ENST00000467898 GPC6Q9Y625 555 aaPredicted RBP10□□□□□ -0.81
LCA5-203ENST00000467898 A0A087WZG4 1122 aa10□□□□□ -0.81
LCA5-203ENST00000467898 SMIM31A0A1B0GVY4 71 aa10□□□□□ -0.81
LCA5-203ENST00000467898 MAP3K7O43318 606 aa10□□□□□ -0.81
LCA5-203ENST00000467898 PEX14O75381 377 aa10□□□□□ -0.81
LCA5-203ENST00000467898 PABPC4LP0CB38 370 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 PYGMP11217 842 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ATP1A3P13637 1013 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ACADSBP45954 432 aa10□□□□□ -0.81
LCA5-203ENST00000467898 OCRLQ01968 901 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ST3GAL1Q11201 340 aa10□□□□□ -0.81
LCA5-203ENST00000467898 TBL3Q12788 808 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 DCTN2Q13561 401 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 SH3D19Q5HYK7 790 aa10□□□□□ -0.81
LCA5-203ENST00000467898 CCDC129Q6ZRS4 1044 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ZNF662Q6ZS27 426 aa10□□□□□ -0.81
LCA5-203ENST00000467898 PIGWQ7Z7B1 504 aa10□□□□□ -0.81
LCA5-203ENST00000467898 LONP2Q86WA8 852 aa10□□□□□ -0.81
LCA5-203ENST00000467898 PASD1Q8IV76 773 aa10□□□□□ -0.81
LCA5-203ENST00000467898 GSPT2Q8IYD1 628 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 DPF2Q92785 391 aa10□□□□□ -0.81
LCA5-203ENST00000467898 SNF8Q96H20 258 aa10□□□□□ -0.81
LCA5-203ENST00000467898 VPS50Q96JG6 964 aa10□□□□□ -0.81
LCA5-203ENST00000467898 PRPF18Q99633 342 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 TMBIM4Q9HC24 238 aa10□□□□□ -0.81
LCA5-203ENST00000467898 ETNK2Q9NVF9 386 aa10□□□□□ -0.81
LCA5-203ENST00000467898 HERC5Q9UII4 1024 aaKnown RBP10□□□□□ -0.81
LCA5-203ENST00000467898 LNPEPQ9UIQ6 1025 aa10□□□□□ -0.81
LCA5-203ENST00000467898 MYH13Q9UKX3 1938 aa9.99□□□□□ -0.81
LCA5-203ENST00000467898 IGF2BP3O00425 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
LCA5-203ENST00000467898 TPBGLP0DKB5 382 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms