RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 HCFC2Q9Y5Z7 792 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 CFAP47Q6ZTR5 3102 aa11.9□□□□□ -0.5
HDAC3-203ENST00000467533 M0QZ92 97 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 FOXP2O15409 715 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 CA8P35219 290 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 SARSP49591 514 aaKnown RBP11.89□□□□□ -0.51
HDAC3-203ENST00000467533 TDGQ13569 410 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 GNPTABQ3T906 1256 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 KIAA1841Q6NSI8 718 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 FAM49AQ9H0Q0 323 aaPredicted RBP11.89□□□□□ -0.51
HDAC3-203ENST00000467533 NGRNQ9NPE2 291 aaKnown RBP11.89□□□□□ -0.51
HDAC3-203ENST00000467533 CYP26B1Q9NR63 512 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 RNF216Q9NWF9 866 aaPredicted RBP11.89□□□□□ -0.51
HDAC3-203ENST00000467533 NCDNQ9UBB6 729 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 CDV3Q9UKY7 258 aaKnown RBP11.89□□□□□ -0.51
HDAC3-203ENST00000467533 DUSP12Q9UNI6 340 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 LZTS1Q9Y250 596 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 PCDHB7Q9Y5E2 793 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 OTOGLQ3ZCN5 2332 aa11.89□□□□□ -0.51
HDAC3-203ENST00000467533 EOMESO95936 686 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 LAG3P18627 525 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 HOXA13P31271 388 aaPredicted RBP11.88□□□□□ -0.51
HDAC3-203ENST00000467533 ATXN1P54253 815 aaKnown RBP11.88□□□□□ -0.51
HDAC3-203ENST00000467533 NEDD9Q14511 834 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 GRIK4Q16099 956 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 SPECC1Q5M775 1068 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 ZMYM1Q5SVZ6 1142 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 IER5Q5VY09 327 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 STOX1Q6ZVD7 989 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 TMC7Q7Z402 723 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 ACSF2Q96CM8 615 aaPredicted RBP11.88□□□□□ -0.51
HDAC3-203ENST00000467533 TTC14Q96N46 770 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 PADI3Q9ULW8 664 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 USTQ9Y2C2 406 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 TRPV2Q9Y5S1 764 aa11.88□□□□□ -0.51
HDAC3-203ENST00000467533 OPLAHO14841 1288 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 KINO60870 393 aaKnown RBP11.87□□□□□ -0.51
HDAC3-203ENST00000467533 RPLP2P05387 115 aaKnown RBP11.87□□□□□ -0.51
HDAC3-203ENST00000467533 ADRB1P08588 477 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 FGRP09769 529 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 SP9P0CG40 484 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 MARK3P27448 753 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 IGBP1P78318 339 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 PLCB3Q01970 1234 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 TMEM62Q0P6H9 643 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 SMC1AQ14683 1233 aaKnown RBP11.87□□□□□ -0.51
HDAC3-203ENST00000467533 ATAT1Q5SQI0 421 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 XRRA1Q6P2D8 792 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 MIER1Q8N108 512 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 C12orf76Q8N812 135 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-203ENST00000467533 VAT1LQ9HCJ6 419 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 TYW1Q9NV66 732 aaKnown RBP11.87□□□□□ -0.51
HDAC3-203ENST00000467533 TELO2Q9Y4R8 837 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 SQORQ9Y6N5 450 aa11.87□□□□□ -0.51
HDAC3-203ENST00000467533 CHD8Q9HCK8 2581 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 CFHP08603 1231 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 GHRHRQ02643 423 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 TBC1D8BQ0IIM8 1120 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 ASPRV1Q53RT3 343 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 FAM102BQ5T8I3 360 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 VPS53Q5VIR6 699 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 FCHSD1Q86WN1 690 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 PNMA1Q8ND90 353 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 ZBTB10Q96DT7 871 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 ZKSCAN3Q9BRR0 538 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 AMNQ9BXJ7 453 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 CWH43Q9H720 699 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 JMJD4Q9H9V9 463 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 DZANK1Q9NVP4 752 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 MAP3K20Q9NYL2 800 aaKnown RBP11.86□□□□□ -0.51
HDAC3-203ENST00000467533 PCDHA1Q9Y5I3 950 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
HDAC3-203ENST00000467533 SPTBN2O15020 2390 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 DENND3A2RUS2 1198 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 DCDC2BA2VCK2 349 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 MBLAC1A4D2B0 266 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-203ENST00000467533 TRIM6-TRIM34B2RNG4 842 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 FIBPO43427 364 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 NARSO43776 548 aaKnown RBP11.85□□□□□ -0.51
HDAC3-203ENST00000467533 PDE4AP27815 886 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 PPM1AP35813 382 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 TCF7P36402 384 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-203ENST00000467533 LMNB2Q03252 620 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 KRT17Q04695 432 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
HDAC3-203ENST00000467533 TMEM266Q2M3C6 531 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 KANK3Q6NY19 840 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 CCDC149Q6ZUS6 474 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 OTOP3Q7RTS5 596 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 GPR161Q8N6U8 529 aaKnown RBP11.85□□□□□ -0.51
HDAC3-203ENST00000467533 SUMF1Q8NBK3 374 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 TMX1Q9H3N1 280 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 TBC1D17Q9HA65 648 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 ERAP1Q9NZ08 941 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 CA14Q9ULX7 337 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 C2orf16Q68DN1 1984 aa11.85□□□□□ -0.51
HDAC3-203ENST00000467533 ATRXP46100 2492 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 KRBA1A5PL33 1030 aa11.84□□□□□ -0.51
HDAC3-203ENST00000467533 C2orf71A6NGG8 1288 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms