RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 USP51Q70EK9 711 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 C16orf59Q7L2K0 433 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 MTDHQ86UE4 582 aaKnown RBP6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 ZFPM1Q8IX07 1006 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 ZBTB38Q8NAP3 1195 aaPredicted RBP6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 EDAQ92838 391 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 SRPK1Q96SB4 655 aaKnown RBP6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 DNAJC7Q99615 494 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 RIC8BQ9NVN3 520 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 USP35Q9P2H5 1018 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 NAT1P18440 290 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 GJA4P35212 333 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 ETV4P43268 484 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 BMS1Q14692 1282 aaKnown RBP6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 NFE2L2Q16236 605 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 LONRF2Q1L5Z9 754 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 RNF151Q2KHN1 245 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 ZMAT1Q5H9K5 638 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 OSTM1Q86WC4 334 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 CDC6Q99741 560 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 MRIQ9BWK5 157 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 PCED1AQ9H1Q7 454 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 ZSWIM4Q9H7M6 989 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 KANSL2Q9H9L4 492 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 ARHGAP28Q9P2N2 729 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 PCDHA8Q9Y5H6 950 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 ATP23Q9Y6H3 246 aa6.76□□□□□ -1.33
PRPF40A-205ENST00000467114 FAM153BP0C7A2 387 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 PYGMP11217 842 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 PDE6AP16499 860 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 COMTP21964 271 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 PTGS1P23219 599 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 MTERF2Q49AM1 385 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 CXXC5Q7LFL8 322 aaKnown RBP6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 PTRH1Q86Y79 214 aaKnown RBP6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 FUKQ8N0W3 1084 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 SCYL1Q96KG9 808 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 ADOQ96SZ5 270 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 ZDHHC5Q9C0B5 715 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 INCENPQ9NQS7 918 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 CATSPERZQ9NTU4 200 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 CBLCQ9ULV8 474 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 OAZ3Q9UMX2 235 aa6.75□□□□□ -1.33
PRPF40A-205ENST00000467114 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 RAD17O75943 681 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 C4BPAP04003 597 aaKnown RBP6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 CR2P20023 1033 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 AOAHP28039 575 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 JAM2P57087 298 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 GABREP78334 506 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 GUCY1A3Q02108 690 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 STILQ15468 1287 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 AGBL4Q5VU57 503 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 WNK4Q96J92 1243 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 GALNT8Q9NY28 637 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 BTBD7Q9P203 1132 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 PFDN2Q9UHV9 154 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 FBXO10Q9UK96 956 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 SLC30A1Q9Y6M5 507 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 KDM2BQ8NHM5 1336 aa6.74□□□□□ -1.33
PRPF40A-205ENST00000467114 CCDC85CA6NKD9 419 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 MATN2O00339 956 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 GSTA4O15217 222 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 CLASP2O75122 1294 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 HERVK_113P62684 666 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 IL13RA1P78552 427 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 LACTBP83111 547 aaPredicted RBP6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 SSRP1Q08945 709 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 FOXE3Q13461 319 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 SQSTM1Q13501 440 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 NFYCQ13952 458 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 CRY1Q16526 586 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 WDR72Q3MJ13 1102 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 MIIPQ5JXC2 388 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 RNF207Q6ZRF8 634 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 Q6ZSN1 163 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 EXOC2Q96KP1 924 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 RNPC3Q96LT9 517 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 IPO9Q96P70 1041 aaKnown RBP6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 SMURF1Q9HCE7 757 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 TBX22Q9Y458 520 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 HS3ST3A1Q9Y663 406 aa6.73□□□□□ -1.33
PRPF40A-205ENST00000467114 KRT15P19012 456 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 RRADP55042 308 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 ST5P78524 1137 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 DUSP8Q13202 625 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 EIF4HQ15056 248 aaKnown RBP6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 C2orf27AQ580R0 203 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 FAM47CQ5HY64 1035 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 JAZF1Q86VZ6 243 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 ZNF503Q96F45 646 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 MSL2Q9HCI7 577 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 NR2E1Q9Y466 385 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 PCDHA9Q9Y5H5 950 aa6.72□□□□□ -1.33
PRPF40A-205ENST00000467114 MPIG6BO95866 241 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 SRGAP2CP0DJJ0 459 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 NOLC1Q14978 699 aaKnown RBP eCLIP6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 TBR1Q16650 682 aa6.71□□□□□ -1.34
PRPF40A-205ENST00000467114 GIMAP6Q6P9H5 292 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms