RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 MAMDC4Q6UXC1 1216 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 NSMFQ6X4W1 530 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 HEATR3Q7Z4Q2 680 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 FRMD5Q7Z6J6 570 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 CCDC144CPQ8IYA2 1237 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 SRBD1Q8N5C6 995 aaKnown RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 NSUN6Q8TEA1 469 aaKnown RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 VTI1AQ96AJ9 217 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 MRPL38Q96DV4 380 aaKnown RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 KIF2CQ99661 725 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 SENP2Q9HC62 589 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 VAT1LQ9HCJ6 419 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 A1CFQ9NQ94 594 aaKnown RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 HOMER2Q9NSB8 354 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 CYP39A1Q9NYL5 469 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 SEPT9Q9UHD8 586 aaPredicted RBP7.92□□□□□ -1.14
CLDN4-204ENST00000466411 RABGEF1Q9UJ41 708 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 FAM184BQ9ULE4 1060 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 TPCN1Q9ULQ1 816 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 CNPY2Q9Y2B0 182 aa7.92□□□□□ -1.14
CLDN4-204ENST00000466411 DNAJC25-GNG10A0A024R161 153 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 LOC730098B7Z3J9 87 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 CYTH3O43739 400 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 PDGFBP01127 241 aaPredicted RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 C6orf222P0C671 652 aaPredicted RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 CD46P15529 392 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 RXRAP19793 462 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 CDC27P30260 824 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 ADD1P35611 737 aaKnown RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 ADCY7P51828 1080 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 FUT2Q10981 343 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 ITGA7Q13683 1181 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 BECN1Q14457 450 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 SAFBQ15424 915 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 NTRK3Q16288 839 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 GNASQ5JWF2 1037 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 RASGRP2Q7LDG7 609 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 TMCO2Q7Z6W1 182 aaPredicted RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 DEFB128Q7Z7B8 93 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 HSCBQ8IWL3 235 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 FAM133AQ8N9E0 248 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 SMARCC2Q8TAQ2 1214 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 SNX21Q969T3 373 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 INTS4Q96HW7 963 aaKnown RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 CDHR1Q96JP9 859 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 TGS1Q96RS0 853 aaKnown RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 POP1Q99575 1024 aaKnown RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 NAP1L4Q99733 375 aaKnown RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 SLC26A6Q9BXS9 759 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 ZMYND12Q9H0C1 365 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 ABHD16BQ9H3Z7 469 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 PSTPIP2Q9H939 334 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 VTA1Q9NP79 307 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 RIC8AQ9NPQ8 531 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 VPS9D1Q9Y2B5 631 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 V9GY48 417 aaPredicted RBP7.91□□□□□ -1.14
CLDN4-204ENST00000466411 ASTN1O14525 1302 aa7.91□□□□□ -1.14
CLDN4-204ENST00000466411 BAZ2BQ9UIF8 2168 aaKnown RBP7.9□□□□□ -1.14
CLDN4-204ENST00000466411 KIAA1217Q5T5P2 1943 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 CFBP00751 764 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 SLC4A3P48751 1232 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 RPS6P62753 249 aaKnown RBP7.9□□□□□ -1.14
CLDN4-204ENST00000466411 CCT2P78371 535 aaKnown RBP7.9□□□□□ -1.14
CLDN4-204ENST00000466411 SCRN1Q12765 414 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 STK3Q13188 491 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 ME3Q16798 604 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 GNPTABQ3T906 1256 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 TCEAL5Q5H9L2 206 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 CXCL17Q6UXB2 119 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 REXO1Q8N1G1 1221 aaKnown RBP7.9□□□□□ -1.14
CLDN4-204ENST00000466411 FAM184AQ8NB25 1140 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 KATNBL1Q9H079 304 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 MTUS1Q9ULD2 1270 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 RIPK3Q9Y572 518 aa7.9□□□□□ -1.14
CLDN4-204ENST00000466411 FLNBO75369 2602 aaKnown RBP7.9□□□□□ -1.15
CLDN4-204ENST00000466411 LCTP09848 1927 aa7.9□□□□□ -1.15
CLDN4-204ENST00000466411 ZFYVE26Q68DK2 2539 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 FRMPD4Q14CM0 1322 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 DDX11L8A8MPP1 907 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 K7ELQ4 463 aaPredicted RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 STXBP3O00186 592 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 NFIBO00712 420 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 NKRFO15226 690 aaKnown RBP eCLIP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 MAFGO15525 162 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 GJB5O95377 273 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 HSP90AA1P07900 732 aaKnown RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 TGFB3P10600 412 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 ACTN1P12814 892 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 CCND2P30279 289 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 ALDH5A1P51649 535 aaPredicted RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 DEFB103AP81534 67 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 BEX3Q00994 111 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 BAATQ14032 418 aaPredicted RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 STXBP2Q15833 593 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 BRDTQ58F21 947 aaPredicted RBP7.89□□□□□ -1.15
CLDN4-204ENST00000466411 ARHGEF16Q5VV41 709 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 WWC2Q6AWC2 1192 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 CCDC82Q8N4S0 544 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 TMEM105Q8N8V8 129 aa7.89□□□□□ -1.15
CLDN4-204ENST00000466411 DAGLBQ8NCG7 672 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms