RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 REXO2Q9Y3B8 237 aaKnown RBP14.96□□□□□ -0.01
UBE4B-206ENST00000466379 ASTN1O14525 1302 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 ARHGEF35A5YM69 484 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 TUBB4AP04350 444 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 KCNMA1Q12791 1236 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 UGCGQ16739 394 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 ZC3H3Q8IXZ2 948 aaKnown RBP14.95□□□□□ -0.02
UBE4B-206ENST00000466379 KCTD17Q8N5Z5 321 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 RETREG2Q8NC44 543 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 DCPSQ96C86 337 aaKnown RBP14.95□□□□□ -0.02
UBE4B-206ENST00000466379 SYT17Q9BSW7 474 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 TFR2Q9UP52 801 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 EPN1Q9Y6I3 576 aaPredicted RBP14.95□□□□□ -0.02
UBE4B-206ENST00000466379 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 CETN3O15182 167 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 URI1O94763 535 aaPredicted RBP14.95□□□□□ -0.02
UBE4B-206ENST00000466379 NDUFA10O95299 355 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 GAP43P17677 238 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 CASQ1P31415 396 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 MAP3K9P80192 1104 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 APBA1Q02410 837 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 EDRF1Q3B7T1 1238 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 C9orf131Q5VYM1 1079 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 TRIM59Q8IWR1 403 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 SULF1Q8IWU6 871 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 L2HGDHQ9H9P8 463 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 PARVGQ9HBI0 331 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 TRAF3IP3Q9Y228 551 aa14.95□□□□□ -0.02
UBE4B-206ENST00000466379 P4HBP07237 508 aaKnown RBP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 MUTP22033 750 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 MEA1Q16626 185 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 FIGNQ5HY92 759 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 MOB2Q70IA6 237 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 SAMD3Q8N6K7 520 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 FIZ1Q96SL8 496 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 CRACR2AQ9BSW2 395 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 TEX13BQ9BXU2 312 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 ZSWIM4Q9H7M6 989 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 OLFML3Q9NRN5 406 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 TRIM10Q9UDY6 481 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 PNMA2Q9UL42 364 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 ZMYM2Q9UBW7 1377 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 A0A1W2PQJ5 194 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 CALUO43852 315 aaPredicted RBP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 SORBS3O60504 671 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 HIP1RO75146 1068 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 SLU7O95391 586 aaKnown RBP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 GNA14O95837 355 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 CCNE2O96020 404 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 NR3C2P08235 984 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 PLEKP08567 350 aaPredicted RBP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 CASP4P49662 377 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 OAZ1P54368 228 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 PDE4CQ08493 712 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 BMT2Q1RMZ1 405 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 PADI6Q6TGC4 694 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 NEK9Q8TD19 979 aa14.94□□□□□ -0.02
UBE4B-206ENST00000466379 A1CFQ9NQ94 594 aaKnown RBP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 TYW1Q9NV66 732 aaKnown RBP14.94□□□□□ -0.02
UBE4B-206ENST00000466379 PDXKO00764 312 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 TGFB1I1O43294 461 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 NR3C1P04150 777 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 CCND2P30279 289 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 ARHGAP25P42331 645 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 MARSP56192 900 aaKnown RBP14.93□□□□□ -0.02
UBE4B-206ENST00000466379 ARHGAP29Q52LW3 1261 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 ODR4Q5SWX8 454 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 VSIG10LQ86VR7 867 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 DAW1Q8N136 415 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 ZNF397Q8NF99 534 aaPredicted RBP14.93□□□□□ -0.02
UBE4B-206ENST00000466379 LSM14BQ9BX40 385 aaKnown RBP14.93□□□□□ -0.02
UBE4B-206ENST00000466379 NHEJ1Q9H9Q4 299 aaPredicted RBP14.93□□□□□ -0.02
UBE4B-206ENST00000466379 ELP3Q9H9T3 547 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 TBC1D22BQ9NU19 505 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 ZNHIT6Q9NWK9 470 aaKnown RBP14.93□□□□□ -0.02
UBE4B-206ENST00000466379 CYP39A1Q9NYL5 469 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 TELO2Q9Y4R8 837 aa14.93□□□□□ -0.02
UBE4B-206ENST00000466379 LRRC53A6NM62 1247 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 AKAP3O75969 853 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 QARSP47897 775 aaKnown RBP14.92□□□□□ -0.02
UBE4B-206ENST00000466379 HERVK_113P62684 666 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 MAPK7Q13164 816 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 ZNF569Q5MCW4 686 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 UTP14CQ5TAP6 766 aaKnown RBP14.92□□□□□ -0.02
UBE4B-206ENST00000466379 RRAGAQ7L523 313 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 FAM178BQ8IXR5 827 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 NEK11Q8NG66 645 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 CLMNQ96JQ2 1002 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 ACAD9Q9H845 621 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 MYH11P35749 1972 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 PTPRFP10586 1907 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 DOCK5Q9H7D0 1870 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 USO1O60763 962 aaKnown RBP14.92□□□□□ -0.02
UBE4B-206ENST00000466379 RGS20O76081 388 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 RARRES1P49788 294 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 ZNF131P52739 623 aa14.92□□□□□ -0.02
UBE4B-206ENST00000466379 SH3D19Q5HYK7 790 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms