RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 COL9A3Q14050 684 aaPredicted RBP8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 NECTIN1Q15223 517 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 SEC23AQ15436 765 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 FAM47CQ5HY64 1035 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 TAPT1Q6NXT6 567 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 IQCA1Q86XH1 822 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 DGKHQ86XP1 1220 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 CHST13Q8NET6 341 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 DCAF4Q8WV16 495 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 PURBQ96QR8 312 aaKnown RBP8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 ZKSCAN3Q9BRR0 538 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 FTOQ9C0B1 505 aaKnown RBP eCLIP8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 A1CFQ9NQ94 594 aaKnown RBP8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 ZSWIM5Q9P217 1185 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 PCDHGA4Q9Y5G9 962 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 TANC1Q9C0D5 1861 aa8.21□□□□□ -1.1
RPUSD3-212ENST00000466141 TET1Q8NFU7 2136 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 SCAMP3O14828 347 aaKnown RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 ZEB2O60315 1214 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 PLA2G6O60733 806 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 KINO60870 393 aaKnown RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 MYL3P08590 195 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 FAM163BP0C2L3 166 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 IQCF3P0C7M6 154 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 STIP1P31948 543 aaKnown RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 SLC1A4P43007 532 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 STAT2P52630 851 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 SNAP25P60880 206 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 DEFB103AP81534 67 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 ZNF543Q08ER8 600 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 CCDC15Q0P6D6 951 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 TCTN1Q2MV58 587 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 LEXMQ3ZCV2 418 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 DNAJC21Q5F1R6 531 aaKnown RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 CREB3L3Q68CJ9 461 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 WWC2Q6AWC2 1192 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 PTCRAQ6ISU1 281 aaPredicted RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 CC2D1AQ6P1N0 951 aaPredicted RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 TRIM74Q86UV6 250 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 TRIM73Q86UV7 250 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 PHOSPHO2Q8TCD6 241 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 TTC14Q96N46 770 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 ZSCAN10Q96SZ4 725 aaPredicted RBP8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 RASSF4Q9H2L5 321 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 ACAD9Q9H845 621 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 SUGCTQ9HAC7 445 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 RNF146Q9NTX7 359 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 IRAK4Q9NWZ3 460 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 FBXO40Q9UH90 709 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 USP25Q9UHP3 1055 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 FEM1BQ9UK73 627 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 RABL2BQ9UNT1 228 aa8.2□□□□□ -1.1
RPUSD3-212ENST00000466141 PABPN1LA6NDY0 278 aaKnown RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 ASB14A6NK59 587 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 TRIM64CA6NLI5 447 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 KIF28PB7ZC32 967 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 H3BQ06 376 aaPredicted RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 CAND2O75155 1236 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 CDKL5O76039 1030 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 OATP04181 439 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 SUPT20HL2P0C7V6 817 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 NAT2P11245 290 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 ALADP13716 330 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 ZNF132P52740 706 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 WDR5P61964 334 aaKnown RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 PURAQ00577 322 aaKnown RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 ADCY2Q08462 1091 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 CCDC178Q5BJE1 867 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 MUM1L1Q5H9M0 696 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 FAM117BQ6P1L5 589 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 BTNL9Q6UXG8 535 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 HFE2Q6ZVN8 426 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 KCTD1Q719H9 257 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 RALYLQ86SE5 291 aaKnown RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 FAM160B2Q86V87 743 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 STAG2Q8N3U4 1231 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 PNMA1Q8ND90 353 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 NCOA7Q8NI08 942 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 TNPO1Q92973 898 aaKnown RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 MPP4Q96JB8 637 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 SLX1AQ9BQ83 275 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 UBAC1Q9BSL1 405 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 LRRC27Q9C0I9 530 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 DDX56Q9NY93 547 aaKnown RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 RSPH14Q9UHP6 348 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 IKBKGQ9Y6K9 419 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 ZNF536O15090 1300 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 FRMPD2Q68DX3 1309 aaPredicted RBP8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 WDFY4Q6ZS81 3184 aa8.19□□□□□ -1.1
RPUSD3-212ENST00000466141 FSD2A1L4K1 749 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 GRXCR2A6NFK2 248 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 TMEM232C9JQI7 657 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 DCXO43602 365 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 TGFB3P10600 412 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 IMPDH2P12268 514 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 ALAS1P13196 640 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 CD53P19397 219 aa8.18□□□□□ -1.1
RPUSD3-212ENST00000466141 RFC2P35250 354 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms