RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 FAM86C1Q9NVL1 165 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 VPS54Q9P1Q0 977 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 ADD3Q9UEY8 706 aaKnown RBP15.64■□□□□ 0.09
HDAC6-215ENST00000465457 PCDHA7Q9UN72 937 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 KCNJ14Q9UNX9 436 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 ABHD14A-ACY1A0A1B0GW23 586 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 KLRF2D3W0D1 207 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 PLA2G6O60733 806 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 SNHG28P0DPA3 235 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 CMA1P23946 247 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 EDNRBP24530 442 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 NLRP5P59047 1200 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 ZNF200P98182 395 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-215ENST00000465457 PDE4DQ08499 809 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 HIC1Q14526 733 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 PTPAQ15257 358 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 TRIM71Q2Q1W2 868 aaKnown RBP15.63■□□□□ 0.09
HDAC6-215ENST00000465457 EPC2Q52LR7 807 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 MYOCDQ8IZQ8 938 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 CCDC155Q8N6L0 562 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 FSIP1Q8NA03 581 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 DAGLBQ8NCG7 672 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 SP7Q8TDD2 431 aaPredicted RBP15.63■□□□□ 0.09
HDAC6-215ENST00000465457 SCFD2Q8WU76 684 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 RRP36Q96EU6 259 aaKnown RBP15.63■□□□□ 0.09
HDAC6-215ENST00000465457 CLDND1Q9NY35 253 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 SEC63Q9UGP8 760 aaKnown RBP15.63■□□□□ 0.09
HDAC6-215ENST00000465457 KIAA1671Q9BY89 1806 aa15.63■□□□□ 0.09
HDAC6-215ENST00000465457 LGR5O75473 907 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 HTRA4P83105 476 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-215ENST00000465457 TCF15Q12870 199 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 CCDC96Q2M329 555 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 UVSSAQ2YD98 709 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 PUS10Q3MIT2 529 aaKnown RBP15.62■□□□□ 0.09
HDAC6-215ENST00000465457 TIGD5Q53EQ6 642 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 BRDTQ58F21 947 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-215ENST00000465457 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 RPAINQ86UA6 219 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 SESTD1Q86VW0 696 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 OSBPL7Q9BZF2 842 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 ALG13Q9NP73 1137 aaKnown RBP15.62■□□□□ 0.09
HDAC6-215ENST00000465457 BARHL2Q9NY43 387 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 HDAC6Q9UBN7 1215 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 GTF2IRD1Q9UHL9 959 aa15.62■□□□□ 0.09
HDAC6-215ENST00000465457 FRMPD2Q68DX3 1309 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-215ENST00000465457 NKRFO15226 690 aaKnown RBP eCLIP15.61■□□□□ 0.09
HDAC6-215ENST00000465457 KPNA6O60684 536 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 NR1I2O75469 434 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 CSPG5O95196 566 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 ZNF286BP0CG31 522 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 PDHBP11177 359 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 RPS6P62753 249 aaKnown RBP15.61■□□□□ 0.09
HDAC6-215ENST00000465457 ARHGAP1Q07960 439 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 IKBKEQ14164 716 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 LY6KQ17RY6 165 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 RNF135Q8IUD6 432 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 KRI1Q8N9T8 703 aaKnown RBP15.61■□□□□ 0.09
HDAC6-215ENST00000465457 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
HDAC6-215ENST00000465457 ENGASEQ8NFI3 743 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 PRKAG3Q9UGI9 489 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 INSL6Q9Y581 213 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 DMDP11532 3685 aa15.61■□□□□ 0.09
HDAC6-215ENST00000465457 FAM237AA0A1B0GTK4 181 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 ESYT2A0FGR8 921 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 TBX10O75333 385 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 GTF2F1P35269 517 aaKnown RBP eCLIP15.6■□□□□ 0.092e-8■■■■■ 34.1
HDAC6-215ENST00000465457 GPM6BQ13491 265 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 HERC4Q5GLZ8 1057 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-215ENST00000465457 AXDND1Q5T1B0 1012 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-215ENST00000465457 PPP1R18Q6NYC8 613 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 CCDC62Q6P9F0 684 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 RNF207Q6ZRF8 634 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 FMR1NBQ8N0W7 255 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-215ENST00000465457 STAG2Q8N3U4 1231 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 DCAF4Q8WV16 495 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 TNFRSF25Q93038 417 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 MFSD14AQ96MC6 490 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 TIGD1Q96MW7 591 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 FUCA2Q9BTY2 467 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 RBSNQ9H1K0 784 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 NSUN3Q9H649 340 aaKnown RBP15.6■□□□□ 0.09
HDAC6-215ENST00000465457 RIOX1Q9H6W3 641 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 PCDHA4Q9UN74 947 aa15.6■□□□□ 0.09
HDAC6-215ENST00000465457 PTPRZ1P23471 2315 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-215ENST00000465457 VPS13AQ96RL7 3174 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 H3BNC9 293 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 GNA11P29992 359 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 ZNF543Q08ER8 600 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 CCDC173Q0VFZ6 552 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 NR5A1Q13285 461 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 SMAD2Q15796 467 aaKnown RBP15.59■□□□□ 0.09
HDAC6-215ENST00000465457 PTPROQ16827 1216 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 TPRNQ4KMQ1 711 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 SYDE2Q5VT97 1194 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 SASS6Q6UVJ0 657 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 BLIDQ8IZY5 108 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 DBF4BQ8NFT6 615 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 DOCK5Q9H7D0 1870 aa15.59■□□□□ 0.09
HDAC6-215ENST00000465457 LOC102724159A0A0B4J2E5 919 aa15.58■□□□□ 0.08
HDAC6-215ENST00000465457 STXBP3O00186 592 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms