RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TAF2Q6P1X5 1199 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 TTC41PQ6P2S7 1318 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 TMEM184AQ6ZMB5 413 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 C12orf76Q8N812 135 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-214ENST00000465269 CDCA3Q99618 268 aaPredicted RBP17.34■□□□□ 0.37
HDAC6-214ENST00000465269 KAT14Q9H8E8 782 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 LRFN2Q9ULH4 789 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 PCDHB12Q9Y5F1 795 aa17.34■□□□□ 0.37
HDAC6-214ENST00000465269 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 PARP1P09874 1014 aaKnown RBP17.33■□□□□ 0.36
HDAC6-214ENST00000465269 STAG3L1P0CL83 205 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 MS4A1P11836 297 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 PBX3P40426 434 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 CLCN5P51795 746 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 RSPH3Q86UC2 560 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 DCLK2Q8N568 766 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 COLGALT1Q8NBJ5 622 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 TCF25Q9BQ70 676 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 ENTPD7Q9NQZ7 604 aa17.33■□□□□ 0.36
HDAC6-214ENST00000465269 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.36
HDAC6-214ENST00000465269 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.36
HDAC6-214ENST00000465269 FNDC1Q4ZHG4 1894 aaPredicted RBP17.33■□□□□ 0.36
HDAC6-214ENST00000465269 TCF7P36402 384 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-214ENST00000465269 UBE3AQ05086 875 aa17.32■□□□□ 0.36
HDAC6-214ENST00000465269 NEDD9Q14511 834 aa17.32■□□□□ 0.36
HDAC6-214ENST00000465269 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
HDAC6-214ENST00000465269 CCDC105Q8IYK2 499 aa17.32■□□□□ 0.36
HDAC6-214ENST00000465269 TRAPPC12Q8WVT3 735 aa17.32■□□□□ 0.36
HDAC6-214ENST00000465269 INPP4AQ96PE3 977 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-214ENST00000465269 MBLAC1A4D2B0 266 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-214ENST00000465269 GCOM1H8Y6P7 765 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-214ENST00000465269 POLR2MP0CAP2 368 aa17.31■□□□□ 0.36
HDAC6-214ENST00000465269 PAK2Q13177 524 aa17.31■□□□□ 0.36
HDAC6-214ENST00000465269 GNPTABQ3T906 1256 aa17.31■□□□□ 0.36
HDAC6-214ENST00000465269 ENAHQ8N8S7 591 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-214ENST00000465269 DTWD2Q8NBA8 298 aa17.31■□□□□ 0.36
HDAC6-214ENST00000465269 RIN2Q8WYP3 895 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-214ENST00000465269 ESR2Q92731 530 aa17.31■□□□□ 0.36
HDAC6-214ENST00000465269 B4E1Z4 1266 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 LMNAP02545 664 aaKnown RBP17.3■□□□□ 0.36
HDAC6-214ENST00000465269 SRGAP2BP0DMP2 458 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 FGFR1P11362 822 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 AOC1P19801 751 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 RARS2Q5T160 578 aaKnown RBP17.3■□□□□ 0.36
HDAC6-214ENST00000465269 HINFPQ9BQA5 517 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 CWH43Q9H720 699 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 ERVK-5Q9HDB9 667 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 HELLSQ9NRZ9 838 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 PKD2L1Q9P0L9 805 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 TRPV2Q9Y5S1 764 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 HCFC2Q9Y5Z7 792 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 ATRXP46100 2492 aa17.3■□□□□ 0.36
HDAC6-214ENST00000465269 GSTTP1A0A1W2PQM5 241 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 ZBTB5O15062 677 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 FIBPO43427 364 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 ATP9AO75110 1047 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 HOXB8P17481 243 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-214ENST00000465269 MX1P20591 662 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 SARSP49591 514 aaKnown RBP17.29■□□□□ 0.36
HDAC6-214ENST00000465269 NFX1Q12986 1120 aaKnown RBP17.29■□□□□ 0.36
HDAC6-214ENST00000465269 NMIQ13287 307 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-214ENST00000465269 PUM1Q14671 1186 aaKnown RBP eCLIP17.29■□□□□ 0.36
HDAC6-214ENST00000465269 TDRD5Q8NAT2 981 aaKnown RBP17.29■□□□□ 0.36
HDAC6-214ENST00000465269 CYP2W1Q8TAV3 490 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 RASGRP4Q8TDF6 673 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 MTMR8Q96EF0 704 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 PIGSQ96S52 555 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 ZSCAN10Q96SZ4 725 aaPredicted RBP17.29■□□□□ 0.36
HDAC6-214ENST00000465269 ADAM7Q9H2U9 754 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 AAASQ9NRG9 546 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 PCDHB7Q9Y5E2 793 aa17.29■□□□□ 0.36
HDAC6-214ENST00000465269 IGSF9BQ9UPX0 1349 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 KLRF2D3W0D1 207 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 INSRRP14616 1297 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 CES5AQ6NT32 575 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 SIX5Q8N196 739 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 PIBF1Q8WXW3 757 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 MRPS27Q92552 414 aaKnown RBP17.28■□□□□ 0.36
HDAC6-214ENST00000465269 GLG1Q92896 1179 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 CDHR5Q9HBB8 845 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 GINS2Q9Y248 185 aa17.28■□□□□ 0.36
HDAC6-214ENST00000465269 TPRNQ4KMQ1 711 aa17.27■□□□□ 0.36
HDAC6-214ENST00000465269 IER5Q5VY09 327 aa17.27■□□□□ 0.36
HDAC6-214ENST00000465269 TMC7Q7Z402 723 aa17.27■□□□□ 0.36
HDAC6-214ENST00000465269 ADAM2Q99965 735 aa17.27■□□□□ 0.36
HDAC6-214ENST00000465269 DLL3Q9NYJ7 618 aa17.27■□□□□ 0.36
HDAC6-214ENST00000465269 MAD2L2Q9UI95 211 aa17.27■□□□□ 0.36
HDAC6-214ENST00000465269 RALYQ9UKM9 306 aaKnown RBP17.27■□□□□ 0.36
HDAC6-214ENST00000465269 FRMPD4Q14CM0 1322 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 FSD2A1L4K1 749 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 NARSO43776 548 aaKnown RBP17.26■□□□□ 0.35
HDAC6-214ENST00000465269 PDE4AP27815 886 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 CA8P35219 290 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 RSPO4Q2I0M5 234 aaPredicted RBP17.26■□□□□ 0.35
HDAC6-214ENST00000465269 PDE12Q6L8Q7 609 aaKnown RBP17.26■□□□□ 0.35
HDAC6-214ENST00000465269 LRRC55Q6ZSA7 311 aa17.26■□□□□ 0.35
HDAC6-214ENST00000465269 IQCA1Q86XH1 822 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms