RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 NEK2P51955 445 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 EPHB1P54762 984 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 ERVK-21P61565 698 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 CACNB2Q08289 660 aaPredicted RBP4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 KLF1Q13351 362 aaPredicted RBP4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 TTF1Q15361 905 aaPredicted RBP4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 TTC38Q5R3I4 469 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 CD300LDQ6UXZ3 194 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 CALML6Q8TD86 181 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 RTF1Q92541 710 aaKnown RBP4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 ACAP3Q96P50 834 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 FMNL2Q96PY5 1086 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 KRTAP4-8Q9BYQ9 185 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 PCDH18Q9HCL0 1135 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 C14orf119Q9NWQ9 140 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 TCEAL9Q9UHQ7 104 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 MSRAQ9UJ68 235 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 G3BP2Q9UN86 482 aaKnown RBP4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 FAN1Q9Y2M0 1017 aa4.96□□□□□ -1.62
HMGXB4-205ENST00000464480 SHTN1A0MZ66 631 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 ZNF839A8K0R7 811 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 GABRDO14764 452 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 SEMA7AO75326 666 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 ENO2P09104 434 aaPredicted RBP4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 TMEM253P0C7T8 217 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 MYBL2P10244 700 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 CR1LQ2VPA4 569 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 PRAMEF9Q5VWM5 478 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 TMEM132EQ6IEE7 984 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 TIGD7Q6NT04 549 aaPredicted RBP4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 PRR23BQ6ZRT6 265 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 ESPNLQ6ZVH7 1005 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 RTN4RL1Q86UN2 441 aaPredicted RBP4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 ZBTB46Q86UZ6 589 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 CILP2Q8IUL8 1156 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 FERMT2Q96AC1 680 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 CHMP4CQ96CF2 233 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 WRNIP1Q96S55 665 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 TMEM209Q96SK2 561 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 FOXB1Q99853 325 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 CCDC8Q9H0W5 538 aaPredicted RBP4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 VTA1Q9NP79 307 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 DLL4Q9NR61 685 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 BTBD7Q9P203 1132 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 KCNG1Q9UIX4 513 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 PLA2G2DQ9UNK4 145 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 CARMIL2Q6F5E8 1435 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 IRS2Q9Y4H2 1338 aa4.95□□□□□ -1.62
HMGXB4-205ENST00000464480 ST20-MTHFSA0A0A6YYL1 179 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 TEX51A0A1B0GUA7 166 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 PRAMEF22A3QJZ6 481 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 LRRC10BA6NIK2 292 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 GOLGA8AA7E2F4 631 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 GOLGA8BA8MQT2 603 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 GOLGA6L22H0YM25 854 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 CFBP00751 764 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 PRLP01236 227 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 C8BP07358 591 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 ALDH6A1Q02252 535 aaKnown RBP4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 ROM1Q03395 351 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 MLANAQ16655 118 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 ABCB5Q2M3G0 1257 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 PRAMEF18Q5VWM3 479 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 LDHDQ86WU2 507 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 AMOTL1Q8IY63 956 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 FAM26EQ8N5C1 309 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 FBXO15Q8NCQ5 510 aaPredicted RBP4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 IGDCC4Q8TDY8 1250 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 FOXRED1Q96CU9 486 aaPredicted RBP4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 MAML3Q96JK9 1138 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 TUBGCP5Q96RT8 1024 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 MCOLN1Q9GZU1 580 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 MS4A5Q9H3V2 200 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 CNTD2Q9H8S5 307 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 SLC39A2Q9NP94 309 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 INCENPQ9NQS7 918 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 TOPORSQ9NS56 1045 aaPredicted RBP4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 UCKL1Q9NWZ5 548 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 MBD1Q9UIS9 605 aaPredicted RBP4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 PCDHA5Q9Y5H7 936 aa4.94□□□□□ -1.62
HMGXB4-205ENST00000464480 MYOCOSA0A1B0GUC4 107 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 E2F8A0AVK6 867 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 MAFGO15525 162 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 MT-CO1P00395 513 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 MC4RP32245 332 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 IARSP41252 1262 aaKnown RBP4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 MC3RP41968 323 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 CDR1P51861 262 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 KRT85P78386 507 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 PFKPQ01813 784 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 MCL1Q07820 350 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 PTPN21Q16825 1174 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 SLFN12LQ6IEE8 588 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 TMC5Q6UXY8 1006 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 LIPIQ6XZB0 460 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 B3GNT8Q7Z7M8 397 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 CXorf67Q86X51 503 aaPredicted RBP4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 PROSER1Q86XN7 944 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 DTX3Q8N9I9 347 aa4.93□□□□□ -1.62
HMGXB4-205ENST00000464480 WDR48Q8TAF3 677 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms