RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 NOP56O00567 594 aaKnown RBP2.2□□□□□ -2.06
TMEM56-204ENST00000463375 ITGB1P05556 798 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 NAT2P11245 290 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 LCP1P13796 627 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 HOXB6P17509 224 aaKnown RBP2.2□□□□□ -2.06
TMEM56-204ENST00000463375 EPHA5P54756 1037 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 CNGB1Q14028 1251 aaPredicted RBP2.2□□□□□ -2.06
TMEM56-204ENST00000463375 PTPAQ15257 358 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 FBXW10Q5XX13 1052 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 HTR3DQ70Z44 454 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 CXXC5Q7LFL8 322 aaKnown RBP2.2□□□□□ -2.06
TMEM56-204ENST00000463375 PPIL6Q8IXY8 311 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 SYNE4Q8N205 404 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 ZNF276Q8N554 614 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 BEND2Q8NDZ0 799 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 MIEF2Q96C03 454 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 TMEM176AQ96HP8 235 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 TRPS1Q9UHF7 1281 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 FZD1Q9UP38 647 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 TELO2Q9Y4R8 837 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 NPFFR2Q9Y5X5 522 aa2.2□□□□□ -2.06
TMEM56-204ENST00000463375 ZNF185O15231 689 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 ABHD16AO95870 558 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 CPP00450 1065 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 LTFP02788 710 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 ITGAVP06756 1048 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 TYRP1P17643 537 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 HOXC12P31275 282 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 MRE11P49959 708 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 KCNQ1P51787 676 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 TAP1Q03518 808 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 FOXF2Q12947 444 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 RIN1Q13671 783 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 GPR162Q16538 588 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 WDR72Q3MJ13 1102 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 PRR16Q569H4 304 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 RABL3Q5HYI8 236 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 HABP4Q5JVS0 413 aaKnown RBP2.19□□□□□ -2.06
TMEM56-204ENST00000463375 DNAJC14Q6Y2X3 702 aaPredicted RBP2.19□□□□□ -2.06
TMEM56-204ENST00000463375 OTOP3Q7RTS5 596 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 C1QL2Q7Z5L3 287 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 GRASPQ7Z6J2 395 aaPredicted RBP2.19□□□□□ -2.06
TMEM56-204ENST00000463375 PNPLA5Q7Z6Z6 429 aaPredicted RBP2.19□□□□□ -2.06
TMEM56-204ENST00000463375 OR6P1Q8NGX9 317 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 OR14K1Q8NGZ2 314 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 PROKR1Q8TCW9 393 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 BTN2A2Q8WVV5 523 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 SMG7Q92540 1137 aaKnown RBP2.19□□□□□ -2.06
TMEM56-204ENST00000463375 WASF1Q92558 559 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 NELL1Q92832 810 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 C1orf159Q96HA4 380 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 CHAMP1Q96JM3 812 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 APBA2Q99767 749 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 NUB1Q9Y5A7 615 aa2.19□□□□□ -2.06
TMEM56-204ENST00000463375 SPATA31A6Q5VVP1 1343 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 KLRG2A4D1S0 409 aaPredicted RBP2.18□□□□□ -2.06
TMEM56-204ENST00000463375 MYADML2A6NDP7 307 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 GRXCR1A8MXD5 290 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 ACOT7O00154 380 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 SNRPB2P08579 225 aaKnown RBP2.18□□□□□ -2.06
TMEM56-204ENST00000463375 NR4A1P22736 598 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 GIPRP48546 466 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 IL13RA1P78552 427 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 DBPQ10586 325 aaPredicted RBP2.18□□□□□ -2.06
TMEM56-204ENST00000463375 COL9A2Q14055 689 aaPredicted RBP2.18□□□□□ -2.06
TMEM56-204ENST00000463375 STILQ15468 1287 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 DENND5AQ6IQ26 1287 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 KIAA1211LQ6NV74 962 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 FBXO42Q6P3S6 717 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 KCNV1Q6PIU1 500 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 Q6YL49 198 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 RBM12BQ8IXT5 1001 aaKnown RBP2.18□□□□□ -2.06
TMEM56-204ENST00000463375 FAM98AQ8NCA5 519 aaKnown RBP2.18□□□□□ -2.06
TMEM56-204ENST00000463375 SPATA3Q8NHX4 192 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 CCDC140Q96MF4 163 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 C1QTNF7Q9BXJ2 289 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 SLC39A2Q9NP94 309 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 COL3A1P02461 1466 aaPredicted RBP2.18□□□□□ -2.06
TMEM56-204ENST00000463375 COL4A3Q01955 1670 aa2.18□□□□□ -2.06
TMEM56-204ENST00000463375 XDHP47989 1333 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 TBX1O43435 398 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 KCNAB3O43448 404 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 FAM20BO75063 409 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 C1RP00736 705 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 ECI1P42126 302 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 MEOX1P50221 254 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 RABGGTBP53611 331 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 GFRA1P56159 465 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 SMAD3P84022 425 aaKnown RBP2.17□□□□□ -2.06
TMEM56-204ENST00000463375 TAGLNQ01995 201 aaKnown RBP2.17□□□□□ -2.06
TMEM56-204ENST00000463375 SAFB2Q14151 953 aaKnown RBP eCLIP2.17□□□□□ -2.06
TMEM56-204ENST00000463375 PRSS53Q2L4Q9 553 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 TMEM200BQ69YZ2 307 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 VHLLQ6RSH7 139 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 CCDC81Q6ZN84 652 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 KCTD1Q719H9 257 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 LRP10Q7Z4F1 713 aa2.17□□□□□ -2.06
TMEM56-204ENST00000463375 HDGFL2Q7Z4V5 671 aaPredicted RBP2.17□□□□□ -2.06
TMEM56-204ENST00000463375 FILIP1Q7Z7B0 1213 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms