RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SUGP1Q8IWZ8 645 aaKnown RBP12.46□□□□□ -0.41
CBX3-205ENST00000462165 FBXL6Q8N531 539 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 NCOA7Q8NI08 942 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 IGDCC4Q8TDY8 1250 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 RRP36Q96EU6 259 aaKnown RBP12.46□□□□□ -0.41
CBX3-205ENST00000462165 SNX27Q96L92 541 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 PHF7Q9BWX1 381 aaPredicted RBP12.46□□□□□ -0.41
CBX3-205ENST00000462165 USP15Q9Y4E8 981 aaPredicted RBP12.46□□□□□ -0.41
CBX3-205ENST00000462165 UBIAD1Q9Y5Z9 338 aa12.46□□□□□ -0.41
CBX3-205ENST00000462165 VPS13AQ96RL7 3174 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 KDM3AQ9Y4C1 1321 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 E7EWF7 191 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 M0QZ92 97 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 MAFGO15525 162 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 ST18O60284 1047 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 SCG2P13521 617 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 UBE3AQ05086 875 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 PAK2Q13177 524 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 MTMR1Q13613 665 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 FAM43BQ6ZT52 329 aaPredicted RBP12.45□□□□□ -0.42
CBX3-205ENST00000462165 RBM23Q86U06 439 aaKnown RBP12.45□□□□□ -0.42
CBX3-205ENST00000462165 CTCFLQ8NI51 663 aaPredicted RBP12.45□□□□□ -0.42
CBX3-205ENST00000462165 ATP8B4Q8TF62 1192 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
CBX3-205ENST00000462165 ZBTB10Q96DT7 871 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 PCYT2Q99447 389 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 FAM49AQ9H0Q0 323 aaPredicted RBP12.45□□□□□ -0.42
CBX3-205ENST00000462165 JADE2Q9NQC1 790 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 SEC63Q9UGP8 760 aaKnown RBP12.45□□□□□ -0.42
CBX3-205ENST00000462165 BARX2Q9UMQ3 279 aaPredicted RBP12.45□□□□□ -0.42
CBX3-205ENST00000462165 PCDHA2Q9Y5H9 948 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 TAF6LQ9Y6J9 622 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 EVPLQ92817 2033 aa12.45□□□□□ -0.42
CBX3-205ENST00000462165 ZDBF2Q9HCK1 2354 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 FSD2A1L4K1 749 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 DDAH1O94760 285 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 ATF7P17544 494 aaPredicted RBP12.44□□□□□ -0.42
CBX3-205ENST00000462165 KIF5BP33176 963 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 ANTXR2P58335 489 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 PTH1RQ03431 593 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 SIGLEC14Q08ET2 396 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 TMEM62Q0P6H9 643 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 MB21D2Q8IYB1 491 aaPredicted RBP12.44□□□□□ -0.42
CBX3-205ENST00000462165 ZNF654Q8IZM8 581 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 SUSD6Q92537 303 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 LZTS2Q9BRK4 669 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 CELF4Q9BZC1 486 aaKnown RBP12.44□□□□□ -0.42
CBX3-205ENST00000462165 TMX1Q9H3N1 280 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 TLE6Q9H808 572 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 PSTPIP2Q9H939 334 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 PKD2L1Q9P0L9 805 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 LRFN2Q9ULH4 789 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 PCDHGC5Q9Y5F6 944 aa12.44□□□□□ -0.42
CBX3-205ENST00000462165 SMIM35A0A1B0GVV1 85 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 PPFIA3O75145 1194 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 SARSP49591 514 aaKnown RBP12.43□□□□□ -0.42
CBX3-205ENST00000462165 GATMP50440 423 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 PLCB4Q15147 1175 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 PLPPR4Q7Z2D5 763 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 NME8Q8N427 588 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 ASIC4Q96FT7 647 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 CDCA3Q99618 268 aaPredicted RBP12.43□□□□□ -0.42
CBX3-205ENST00000462165 AZI2Q9H6S1 392 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 LY9Q9HBG7 655 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 JPH1Q9HDC5 661 aaPredicted RBP12.43□□□□□ -0.42
CBX3-205ENST00000462165 TLR9Q9NR96 1032 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 TRPC6Q9Y210 931 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 PCDHB12Q9Y5F1 795 aa12.43□□□□□ -0.42
CBX3-205ENST00000462165 PLXNA3P51805 1871 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 DMDP11532 3685 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 SPDYE3A6NKU9 549 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 PER2O15055 1255 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 PLEKHA8P1O95397 391 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 GSPT1P15170 499 aaKnown RBP12.42□□□□□ -0.42
CBX3-205ENST00000462165 GNAQP50148 359 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 KRT76Q01546 638 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 UBE2SQ16763 222 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 DUSP6Q16828 381 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 PDE12Q6L8Q7 609 aaKnown RBP12.42□□□□□ -0.42
CBX3-205ENST00000462165 TMEM184AQ6ZMB5 413 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 SRBD1Q8N5C6 995 aaKnown RBP12.42□□□□□ -0.42
CBX3-205ENST00000462165 VN1R2Q8NFZ6 395 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 MICAL1Q8TDZ2 1067 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 TRAPPC12Q8WVT3 735 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 RUFY2Q8WXA3 655 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 RPGRIP1Q96KN7 1286 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 NEK1Q96PY6 1258 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 MTA3Q9BTC8 594 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 MYL10Q9BUA6 226 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 IRF2BPLQ9H1B7 796 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 AAASQ9NRG9 546 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 KCNH7Q9NS40 1196 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 PCDHA6Q9UN73 950 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 PCDHB7Q9Y5E2 793 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 PCDHA8Q9Y5H6 950 aa12.42□□□□□ -0.42
CBX3-205ENST00000462165 NFASCO94856 1347 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 FSCN2O14926 492 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 MGEA5O60502 916 aa12.41□□□□□ -0.42
CBX3-205ENST00000462165 FGF18O76093 207 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms