RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SEZ6LQ9BYH1 1024 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 LRRC27Q9C0I9 530 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 AP5M1Q9H0R1 490 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 TSPY26PQ9H489 355 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 LCTP09848 1927 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 MROH7Q68CQ1 1323 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 DCDC2CA8MYV0 355 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 DDX39AO00148 427 aaKnown RBP16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 ARVCFO00192 962 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 DYNC1LI2O43237 492 aaPredicted RBP16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 ZEB2O60315 1214 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 PQBP1O60828 265 aaKnown RBP16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 ICAM3P32942 547 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 JAK3P52333 1124 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 EPHA7Q15375 998 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 FSCN1Q16658 493 aaKnown RBP16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 SEPT14Q6ZU15 432 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 MIER3Q7Z3K6 550 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 SLC43A3Q8NBI5 491 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 BADQ92934 168 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 PAGE5Q96GU1 130 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 MMTAG2Q9BU76 263 aaKnown RBP16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 POLR3CQ9BUI4 534 aaPredicted RBP16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 UNC45AQ9H3U1 944 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 TUFT1Q9NNX1 390 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 PRDM5Q9NQX1 630 aaPredicted RBP16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 KIAA1468Q9P260 1216 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 SAMM50Q9Y512 469 aa16.97■□□□□ 0.31
TMEM39A-203ENST00000461654 LRRC37A2A6NM11 1700 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 A0A0U1RQG5 324 aaPredicted RBP16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 MYL1P05976 194 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 TGFB3P10600 412 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 RPA1P27694 616 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 SFNP31947 248 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 AFMP43652 599 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 BEX3Q00994 111 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 GRB10Q13322 594 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 ITGB3BPQ13352 177 aaPredicted RBP16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 HYIQ5T013 277 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 TMEM63BQ5T3F8 832 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 PDXDC2PQ6P474 469 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 SV2BQ7L1I2 683 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 SMARCE1Q969G3 411 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 LRCH3Q96II8 777 aa16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 EIF2AK1Q9BQI3 630 aaKnown RBP16.96■□□□□ 0.31
TMEM39A-203ENST00000461654 LTBP2Q14767 1821 aa16.96■□□□□ 0.3
TMEM39A-203ENST00000461654 NFASCO94856 1347 aa16.96■□□□□ 0.3
TMEM39A-203ENST00000461654 NKRFO15226 690 aaKnown RBP eCLIP16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 DHX15O43143 795 aaKnown RBP16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 GTPBP6O43824 516 aaPredicted RBP16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 MUTP22033 750 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 PNOCQ13519 176 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 TMEM119Q4V9L6 283 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 ZNF746Q6NUN9 644 aaPredicted RBP16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 RDM1Q8NG50 284 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 LARP4BQ92615 738 aaKnown RBP16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 CCDC47Q96A33 483 aaKnown RBP16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 PNMA5Q96PV4 448 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 SENP7Q9BQF6 1050 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 TMEM39AQ9NV64 488 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 KIAA1024Q9UPX6 916 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 DNM3Q9UQ16 869 aa16.95■□□□□ 0.3
TMEM39A-203ENST00000461654 WDR64B1ANS9 1081 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 EML1O00423 815 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 ATP9AO75110 1047 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 RGS20O76081 388 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 RAG1P15918 1043 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 ITGB8P26012 769 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 TYRO3Q06418 890 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 NEDD9Q14511 834 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 STX1AQ16623 288 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 CXCL17Q6UXB2 119 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 CATSPER3Q86XQ3 398 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 FAM126BQ8IXS8 530 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 SMAP1Q8IYB5 467 aaPredicted RBP16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 SCFD2Q8WU76 684 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 RAD54LQ92698 747 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 JPH1Q9HDC5 661 aaPredicted RBP16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 BMP2KQ9NSY1 1161 aaPredicted RBP16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 ANO10Q9NW15 660 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 TBX21Q9UL17 535 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 DNAH12Q6ZR08 3092 aa16.94■□□□□ 0.3
TMEM39A-203ENST00000461654 POTEB3A0JP26 581 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 GOLGA6L3A6NEY3 463 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 DKC1O60832 514 aaKnown RBP eCLIP16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 MED24O75448 989 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 CAVIN2O95810 425 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 TIMP1P01033 207 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 CD4P01730 458 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 KCNA2P16389 499 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 CYP4A11Q02928 519 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 SEMA3FQ13275 785 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 NAALADL2Q58DX5 795 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 POTEBQ6S5H4 581 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 B3GNT9Q6UX72 402 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 TPH2Q8IWU9 490 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 GRAMD1CQ8IYS0 662 aa16.93■□□□□ 0.3
TMEM39A-203ENST00000461654 DYDC2Q96IM9 177 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms