RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 UBASH3BQ8TF42 649 aa6.06□□□□□ -1.44
BRCA1-206ENST00000461574 FOXD4L4Q8WXT5 416 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-206ENST00000461574 IL23AQ9NPF7 189 aa6.06□□□□□ -1.44
BRCA1-206ENST00000461574 GPR108Q9NPR9 543 aa6.06□□□□□ -1.44
BRCA1-206ENST00000461574 DIS3Q9Y2L1 958 aaKnown RBP6.06□□□□□ -1.44
BRCA1-206ENST00000461574 WDFY4Q6ZS81 3184 aa6.06□□□□□ -1.44
BRCA1-206ENST00000461574 SYNGAP1Q96PV0 1343 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 COL4A4P53420 1690 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 KRTAP4-8A0A0G2JLE6 195 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 PRR19A6NJB7 356 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 ARVCFO00192 962 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 ADAM11O75078 769 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 DUSP11O75319 330 aaKnown RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 SURF6O75683 361 aaKnown RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 KIF4AO95239 1232 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 CT47B1P0C2W7 299 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 ZNF865P0CJ78 1059 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 SPINK2P20155 84 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 CYP2C18P33260 490 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 STAT3P40763 770 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 TXKP42681 527 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 RABGGTBP53611 331 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 UVSSAQ2YD98 709 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 ZNF792Q3KQV3 632 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 RNF43Q68DV7 783 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 SNRNP48Q6IEG0 339 aaKnown RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 TMED8Q6PL24 325 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 C16orf59Q7L2K0 433 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 RIOX2Q8IUF8 465 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 CLEC10AQ8IUN9 316 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 KLHL23Q8NBE8 558 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 GPR152Q8TDT2 470 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 STK32AQ8WU08 396 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 HERVK_113Q902F9 699 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 FRAT1Q92837 279 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 COL26A1Q96A83 441 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 KLHDC7BQ96G42 594 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 ZNF512BQ96KM6 892 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 MYRFLQ96LU7 910 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 LRFN3Q9BTN0 628 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 CCDC8Q9H0W5 538 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 HIPK3Q9H422 1215 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 VCPKMTQ9H867 229 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 FAM13BQ9NYF5 915 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 SWAP70Q9UH65 585 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 YBX2Q9Y2T7 364 aaKnown RBP6.05□□□□□ -1.44
BRCA1-206ENST00000461574 TMX2Q9Y320 296 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 SLC4A7Q9Y6M7 1214 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 MYH4Q9Y623 1939 aa6.05□□□□□ -1.44
BRCA1-206ENST00000461574 MYH7P12883 1935 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 MYADML2A6NDP7 307 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 VWA5AO00534 786 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 ZBTB39O15060 712 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 IPO8O15397 1037 aaKnown RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 CST5P28325 142 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 CCL23P55773 120 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 ACVR2BQ13705 512 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 TTF1Q15361 905 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 CCDC144BQ3MJ40 725 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 KIAA1755Q5JYT7 1200 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 RASIP1Q5U651 963 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 FAM126BQ8IXS8 530 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 RPUSD2Q8IZ73 545 aaKnown RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 MSL3Q8N5Y2 521 aaKnown RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 CEP120Q8N960 986 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 KLHDC9Q8NEP7 349 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 SDR42E1Q8WUS8 393 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 TEX13BQ9BXU2 312 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 FBXO28Q9NVF7 368 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 ABI2Q9NYB9 513 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 DBNLQ9UJU6 430 aaKnown RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 PPP1R9AQ9ULJ8 1098 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 ISY1Q9ULR0 285 aaKnown RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 COG5Q9UP83 839 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 FNDC3AQ9Y2H6 1198 aaKnown RBP6.04□□□□□ -1.44
BRCA1-206ENST00000461574 PCDHA11Q9Y5I1 949 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 PIEZO1Q92508 2521 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 MUC6Q6W4X9 2439 aa6.04□□□□□ -1.44
BRCA1-206ENST00000461574 PRRC2BQ5JSZ5 2229 aaKnown RBP6.03□□□□□ -1.44
BRCA1-206ENST00000461574 TANC1Q9C0D5 1861 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 FAM86C2PA6NEL3 165 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 ERC2O15083 957 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 CA3P07451 260 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 CYP2D6P10635 497 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 ACTN1P12814 892 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 EEF2P13639 858 aaKnown RBP6.03□□□□□ -1.44
BRCA1-206ENST00000461574 AKR1B1P15121 316 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 MYOGP15173 224 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 ATP2A2P16615 1042 aaKnown RBP6.03□□□□□ -1.44
BRCA1-206ENST00000461574 GRIK1P39086 918 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 CDK7P50613 346 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 GJA9P57773 515 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 GABPAQ06546 454 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 TMEM67Q5HYA8 995 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 FAM83BQ5T0W9 1011 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 SLC9C2Q5TAH2 1124 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 FAM117BQ6P1L5 589 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 FAM20CQ8IXL6 584 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 CPXCR1Q8N123 301 aa6.03□□□□□ -1.44
BRCA1-206ENST00000461574 ANKRD35Q8N283 1001 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms